Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0812 ATGGCTGGTATGGTAGAAAAGGAACAAAAAATTATTGGAATTAACGAAGAGAAAGAGGAGCAAGGGAGTGAGGGGAACAACAAACACACACAATTGGAGAGTGGTCAAGGGGACAGAGACATGGCTCCTGCGGCAGGGAATTCAATTCATAGGTCGGGTTCAAGGCCTCAACTTGATGTTAGCAAAGCAGAAATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTATCTCACCTGGCTCTTGACATTGGAGGGTCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAGCCGATGATAAAAGGAAGAGAATTGTGAAGGAGAGACTGGGGCTTTCTAATGGCAACCGGAGAAGCTACCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACGATAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGTTATGAGTCAACGGAATGGCATAATTAAGGCTACTGGTGGCGGAGCATACAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCAAATTTTTTGCTTAAGGCAATTCGTCATGAAGCTTTCACGCACATGGAGGGCCAAAAAGAGTTTGTTCAAATTGACCCTAATGATTTATTCCCCTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGATTAGTGGGACAAATGTTGGTGGAGGTACTTATTGGGGCTTGGGAAGACTCTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAACTATTGACATGCTAGTTGGGGACATTTATGGTGGCTTGGACTATAATAAGATTGGCCTATCGGCTGCCACTATTGCTTCAAGTTTTGGCAAAACAATATCTGAAAAAAAGGAGCTTGAAGAATACAGGCCTGAAGATATATCACTATCACTTCTACGGATGATTTCTTACAATATTGGCCAGATATCTTACTTGAATGCATTGCGATTCCGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTTCATTTCTGGTCTAATGGGGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTACGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTTGAAAGGTTTCCAATGGGTGCACCATATACAGGAGGCAAGATTCATGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATTACAGCTCCTGTGCCAATGACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAGGGAAGTACTCTGCGATCAGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAAGTGTTTCCCTTATTATCAGACCAAAAATTGTATGAGCCCAATACCATTGATCTTTCAGATCACAATGAATTAGAATATTGGTTCACTATTTTGTCAGAACACTTACCGGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCATTTGCTCGTGCATTTTCAGCCCACTTGGCAAGGTTGAGGGAGGAGCCTTCTGCATATGGGAAGTTAGGCCTGGCTAATCTATTGGAAATGAGGGAAGAATGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGTATCAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGTTGGTGGAACTTGATAGTATGGATGAGGAAACAAGATTGCTGACCCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGGATGAGTCGTAATAAAATGCAGAGACCTTGGCGGGTGGATGATTTTGATGTCTTCAAAGAGAGAATGTTAGGAACCAAGGACAAGAAAATGCCACCTCATAGAAGAGCTTTACTTTTTGTTGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCTCTGGCACGGGAGCTCCTCCGTCGTGGAACTGAAGTAGTTCTTGTTGCAAACTCACTTCCTGCTTTAAATGATGTGACAGCAAGGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGGGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAGGCAGCTCTAACGAAAATTCATCTTCAGTTCCATTGATGGTTGTTGAGAATGGGTGCGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTAGCTGCTGCTGCAAAAGACGCCGATTTGATAATTTTGGAAGGTATGGGTAGGGCTCTTCATACTAACCTCAATGCTCGGTTTAAGTGTGATGCTTTGAAGTTGGCAATGGTAAAAAACCAGAGATTGGCTGAAAAGTTGGTTAAAGGGAACATATACGACTGTGTTTGCAAATATGAGCCTGCTAATTGA 2727 0.4239 MAGMVEKEQKIIGINEEKEEQGSEGNNKHTQLESGQGDRDMAPAAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSADDKRKRIVKERLGLSNGNRRSYPILGGRLHFVKFETIKINECLDFIHSKQLHCGGLESRYSDVMSQRNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERISGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGLDYNKIGLSAATIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQISYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLSDQKLYEPNTIDLSDHNELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLREEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFKERMLGTKDKKMPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTARELPDIVAEAAKHCDILRGAAEAGGLLVDAMINTSGSSNENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGNIYDCVCKYEPAN* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0812 908 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 709 906 - -
Apr1g0812 908 SUPERFAMILY Actin-like ATPase domain 86 226 IPR043129 -
Apr1g0812 908 Pfam Damage-control phosphatase ARMT1-like domain 614 894 IPR002791 -
Apr1g0812 908 PANTHER PANTOTHENATE KINASE 2 29 829 - -
Apr1g0812 908 SUPERFAMILY Actin-like ATPase domain 198 431 IPR043129 -
Apr1g0812 908 SUPERFAMILY AF1104-like 525 906 IPR036075 -
Apr1g0812 908 MobiDBLite consensus disorder prediction 1 60 - -
Apr1g0812 908 TIGRFAM panK_eukar: pantothenate kinase 87 430 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr1g0812 908 Gene3D - 308 420 - -
Apr1g0812 908 Gene3D - 545 630 IPR035073 -
Apr1g0812 908 PIRSF PanK_long 41 908 IPR015844 GO:0004594|GO:0015937
Apr1g0812 908 MobiDBLite consensus disorder prediction 10 26 - -
Apr1g0812 908 PANTHER PANTOTHENATE KINASE 29 829 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr1g0812 908 Gene3D - 79 239 - -
Apr1g0812 908 Pfam Fumble 87 429 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0812 Apr-Chr1 10192528 10205375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0812 K24265 - gmx:100781580 1638.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0812 1 10192528 10205375 Apr9g3105 9 37865078 37877292 ECH
Apr1g0812 1 10192528 10205375 Apr1g0812 1 10192528 10205375 ECH
Apr9g3105 9 37865078 37877292 Apr1g0812 1 10192528 10205375 PCT