Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3103 ATGGAGCGGCCAATTTATAATTCGTTGGAGAAACCGCCACATGATTCCGCCCCCGCCGCCGACCAGGAATCTGAGGTTTCCGATTGCGAGAGCGTTCTTTCCACCGGAGAGACGGGATTTTACGAAGGCGGCGACCTCATCAGGAGCAGATTCGTTCGGGGGTTGGGCTCGCACGGCTTGAAACCCGAGGTGGTGGCGATTCGTAGGAATGCTAGTTCCACCGTGATGGCGCAGGCGCGTGTTCAGTCGTTCCAGATTTTCGCGAGTGCGGTGGCCAAATTGCGCAATGGCAATGCGAACGTGAAGTACGCTTGGTACGGTGCGTCCGGTAAGGAAGAGATAGCCGACATCATCCAACACGGTTTTGGCCCCTCAAAAAGTCATGGCTTGCGTCTCTCTCCAGAAGATTCTCCACTTGAAAGTGTGAAGAGCTCTGTTGTCGACAAAGATGGTTTGAGGCACTTGTTGCTGTGTCGTGTTATCTTGGGGAGGACGGAGGTTGTGCCACGTGGCTCAGAACAATGTCATTCGAGTTCTGATGAGTATGATTCTGGAGTGGATGATATTTCGGATCCCAAGGAGTACATTGTTTGGTGCAATCGGATCAACACTCATGTTTTGCCAGAATATGTTTTGAGTTTCAGGCTTTCTTCCTTGAAAGGGCATGTGAAGACTGGGGAACCTTTCAGACCTTCTTCCCCTTGGATGCCATTCCCCACTCTCATTTCAGTGCTTTCCAAGATTTTGCCGCCGCCTGATATTGCCTTCATTGCCAAGTTTCACAGAGATTATAGGGAAAAGAATATTTCCCGACATGAACTCATACAAAAAGTGAGACTAATAGCAGGAGACAAATTACTGGTTTCGGTCATCAAATCTTTCAGAGCCAAGAAAATGCCTGCAAGCTTTAAGCAAACAAGGTGA 924 0.4924 MERPIYNSLEKPPHDSAPAADQESEVSDCESVLSTGETGFYEGGDLIRSRFVRGLGSHGLKPEVVAIRRNASSTVMAQARVQSFQIFASAVAKLRNGNANVKYAWYGASGKEEIADIIQHGFGPSKSHGLRLSPEDSPLESVKSSVVDKDGLRHLLLCRVILGRTEVVPRGSEQCHSSSDEYDSGVDDISDPKEYIVWCNRINTHVLPEYVLSFRLSSLKGHVKTGEPFRPSSPWMPFPTLISVLSKILPPPDIAFIAKFHRDYREKNISRHELIQKVRLIAGDKLLVSVIKSFRAKKMPASFKQTR* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3103 307 ProSiteProfiles PARP catalytic domain profile. 1 232 IPR012317 GO:0003950
Apr9g3103 307 Pfam RCD1-SRO-TAF4 (RST) plant domain 230 295 IPR022003 -
Apr9g3103 307 Gene3D - 43 215 - -
Apr9g3103 307 ProSiteProfiles RST domain profile. 229 300 IPR022003 -
Apr9g3103 307 SUPERFAMILY ADP-ribosylation 78 215 - -
Apr9g3103 307 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 45 301 IPR044964 -
Apr9g3103 307 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g3103 307 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 45 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3103 Apr-Chr9 37848787 37851562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3103 - - gmx:100784311 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3103 9 37848787 37851562 Apr1g0815 1 10323083 10325132 PCT