Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0815 ATGGAACTAACTTTCCCTCAACATGAAGGCTATGCCAGCAACGAAGATTCCACTGTTTCTGATTGCGAGAGTGCTGTTTCCCCCACCCAAGTGCTGCGTCAAAATAATCTTTTCATTAGACTTGAAGAAGGCGACGTGCTTCATGATCTCATTAAAAGAAGGTTCCTTCGTGGACTGGGCTTGCTCGGCCCCAAAACAGAGCTTGTAGCCGTTCACCGAAATGCATGTTCCACCGTAGTTTCGCAAGCGCGCCTTCAATCGTTTCAGGTTTACTCAAGGGCGGTGGCAAAGCTCCGCCATGGGGATGCCAATGTCAAGTATGCTTGGTACGGAACTCGCGGAGAGAAGGAGATCAGCGACGTCGTTTCACACGGTTTTAGTCACGCACATGGTCAAAAACTTGTTCTCAGTCCAGATGACTCTCCTCTCCAAAGTGCGAAAAGTTGTGTTGTTGGGAAAGACGGTTTGAGGCACGCGTTATTGTGCCGCGTTATTCTGGGGAGGCAAGAGCTTGTGAACCCTGGCAGTGGCACACAGCAATGTTGTCCGAGTTCGGAGGAGTACGATTCTGGGGTGGATAGTTATACAGCTCCTAGCAAGTACATAATTTGGAGTAACAGAATGAACACTCATGTCTTGCCTGCATATGTTATTAGCTTCAGGGTTCCTTCTTTCAAAGGGATTGAGAATAGTGAAGAAGAACCTTTGAGACCGACTTCGCCTTGGATGCCATTCCCGACTCTGATTTCGGTGCTTTCCAAGTTTTTGCCTGCACATGATGTTGCAATGATCTCAAAGTCCTACAAAGATAAAAAAGAAAGAAAGATTTCACGACGTGAACTGATACAAAGAGTGAGACAAATAGCGGGAGATAAGTTGCTGGCTTCAGTCATCAAGACTTACAGAAACAAGAGAAAATCAAGCTTTCAGCAAACAATTTCAAGGAATGGTTTAGGGGCGCGGATAGAGTGA 972 0.464 MELTFPQHEGYASNEDSTVSDCESAVSPTQVLRQNNLFIRLEEGDVLHDLIKRRFLRGLGLLGPKTELVAVHRNACSTVVSQARLQSFQVYSRAVAKLRHGDANVKYAWYGTRGEKEISDVVSHGFSHAHGQKLVLSPDDSPLQSAKSCVVGKDGLRHALLCRVILGRQELVNPGSGTQQCCPSSEEYDSGVDSYTAPSKYIIWSNRMNTHVLPAYVISFRVPSFKGIENSEEEPLRPTSPWMPFPTLISVLSKFLPAHDVAMISKSYKDKKERKISRRELIQRVRQIAGDKLLASVIKTYRNKRKSSFQQTISRNGLGARIE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0815 323 ProSiteProfiles PARP catalytic domain profile. 23 240 IPR012317 GO:0003950
Apr1g0815 323 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 8 314 - -
Apr1g0815 323 MobiDBLite consensus disorder prediction 1 20 - -
Apr1g0815 323 SUPERFAMILY ADP-ribosylation 41 221 - -
Apr1g0815 323 Gene3D - 38 222 - -
Apr1g0815 323 ProSiteProfiles RST domain profile. 236 307 IPR022003 -
Apr1g0815 323 Pfam RCD1-SRO-TAF4 (RST) plant domain 237 302 IPR022003 -
Apr1g0815 323 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 8 314 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0815 Apr-Chr1 10323083 10325132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0815 - - pvu:PHAVU_009G178500g 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3103 9 37848787 37851562 Apr1g0815 1 10323083 10325132 PCT