Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3097 ATGCCAGGGATTGTTATAACTGGAGTAAATAATGAAGGGGAAGTGAATGAAATGAGTGGGACTGGGAACACTTCCCCCTTTATGGAAACCTTAACACCAATCAAGTCCCCGAGGAGTTCCTCGAGTCCACAAAGACACCAAAATGCTGATCCAAATCTTCCTGTTGATGGGGTGGTTGACACTTCCTCCATTGAGAGGCTTTCTGAAAATGTGTGTGACATGCAAAGTTCTGATCAATCATCCTCAACGCGAAGTCTTGGATCTGCTGGTTATGAGTCTAAAATCAATTCAGAATTGCACAATCTGGTTGAAGAAAAGACTTTGGTGGTGGAGGTAGGGAAAAAGGAAGTGCAGAAGAAAACAAAAGGGAATTCTAGCAGTAAAGCATCTTCTAGAATGGGTAGTTTGTCCAATGATAAGAAGTTGGATAAGATTCGGCCTGCAACTGCAAGTTCAGTTTTTTCAGAAACATCATCAAAGTCAAGACCAAAAGGAAAAAGTACTCCTCCAAAACCTCCTGTTGATAGGAAGAATGATAATCCTTTGAGAAAAGAAAATTCAGGTATTACCCGTGTGAAAAAATCTGTTGGAAGATCAGTGTCACAAATTCGAGTTGAGAATTCCACCGAATCAGCATTATATAAACCTGAACTTGGACCAGCTTTACTAAAGCAAGCAAGGGACATGATTTCATCAGGAGATAATCCGCAGAAAGCTCTTGAATTAGCTCTTCAAGCAGTGAAATTGTTTGAAAAGACTGCTAATGGGAAACCAAGTTTAGACATAGTTATGTGCTTCCATGTTACTGCAGCAATATATTGCACCTTGGGCCATTTCAATGAGGCAATTCCAATTATAAAACGCTCAATTGAGATTCCTGTTATTGAGGAAGGCCAACAACATGCCATTGCTAAATTTGCTGGTCACATGCAACTGGGAGACATCTATGCCGTGGTGGGCCAGCTTGAAAATTCAATTAAGTGCTACACTGCAGGGTTGGAAATACAAAGGAAGGTTTTGGGAGAAACAGACCCAAGAGTTGGTGAAACTTGTCGGTATGCGGCTGAAGCAAACTTTCAAGCAATGCAATTTGACGAGGCAGAGAGGCTGTGCCAAATGGCTCTTGACATTCATAGAGCCAATGGTTCACCCTCATCTCTTGAAGAGGCAGCTGATAGGAGGCTAATGGGGCTTATATGTGAAGCAAATGGAAATCATGAAGCAGCATTGGAGCATCTTGTTTTGGCAAGCATTGCAATGGTGGAAAACGGTGAGGGAGTGGAAGTTGCATCCGTTGACTGCAGCATTGGAGACACATACTTATCCTTGGCTAGATATGATGAGGCCATCTTTGCATATCAGAGAGCTTTAACAGTTCTCAAGACCCACAAAGGTGAGAATCATCCAGCTGTAGGATTAGTCTTAGTACGTCTTGCTGACTTATATAACAGGACTTGGAAGACAAGGGAATCAAAATCTTATTGTGAGAATGCACTTAGAATCTATGAGAATCCCATGCCTGGAGTCCCATCAGAGGAGATCGCAAGTGGGCTGATGAATGTTTCAGCCATCTATGAGTCAATGAATGAGCTAGAACAGGCACTTAAACTGCTGCACAAGGCACTAGGGATACATAATGATGCCCCTGGTCAACAAAGCACAATAGCAGGAATTGAAGCCCAAATTGGGGTCATGTACTACATGTTGGGGAACTATACTGAATCTTACAATGCTTTTCAGAATGCTGTGTCAAAGCTTCGTGTAACTGGAGAAAAGAAATCAGCCTACTTTGGTACTATTCTTAATCAAATGGGACTTGCTTGTGTGCAGCTTCATGCATTAAGTGAGGCTACACAGTTATTTGAAGAAGCGAGGATTATTTTGGAACAAGAGAATGGACCCTATCACCCTGAAACGCTTGGAGTATATAGCAATCTTGCTGGCACCTATGATGCCATGGGCAGGGTGGATGAGGCGATTGAAATTCTGGAGCACATTGTGGGTACGAGGGAAGAAAAACTTGGAACAGCAAATCCTGATGTTGTTTATGAGAAGAGAAGGTTGCATGAGTTGTTGAAGGAAACAGGTAGAGTTCGAAAGAGAAAAACCAAGTCACTTGAGATCCTTCTTGATGCCAATGTTCATAAAAGCTCTTCTAATCTGATCATCCACTTTGCCTTCACCAATAATCTGACTTAG 2199 0.4211 MPGIVITGVNNEGEVNEMSGTGNTSPFMETLTPIKSPRSSSSPQRHQNADPNLPVDGVVDTSSIERLSENVCDMQSSDQSSSTRSLGSAGYESKINSELHNLVEEKTLVVEVGKKEVQKKTKGNSSSKASSRMGSLSNDKKLDKIRPATASSVFSETSSKSRPKGKSTPPKPPVDRKNDNPLRKENSGITRVKKSVGRSVSQIRVENSTESALYKPELGPALLKQARDMISSGDNPQKALELALQAVKLFEKTANGKPSLDIVMCFHVTAAIYCTLGHFNEAIPIIKRSIEIPVIEEGQQHAIAKFAGHMQLGDIYAVVGQLENSIKCYTAGLEIQRKVLGETDPRVGETCRYAAEANFQAMQFDEAERLCQMALDIHRANGSPSSLEEAADRRLMGLICEANGNHEAALEHLVLASIAMVENGEGVEVASVDCSIGDTYLSLARYDEAIFAYQRALTVLKTHKGENHPAVGLVLVRLADLYNRTWKTRESKSYCENALRIYENPMPGVPSEEIASGLMNVSAIYESMNELEQALKLLHKALGIHNDAPGQQSTIAGIEAQIGVMYYMLGNYTESYNAFQNAVSKLRVTGEKKSAYFGTILNQMGLACVQLHALSEATQLFEEARIILEQENGPYHPETLGVYSNLAGTYDAMGRVDEAIEILEHIVGTREEKLGTANPDVVYEKRRLHELLKETGRVRKRKTKSLEILLDANVHKSSSNLIIHFAFTNNLT* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3097 732 ProSiteProfiles TPR repeat profile. 515 548 IPR019734 GO:0005515
Apr9g3097 732 Gene3D Tetratricopeptide repeat domain 221 416 IPR011990 GO:0005515
Apr9g3097 732 ProSiteProfiles TPR repeat profile. 430 463 IPR019734 GO:0005515
Apr9g3097 732 MobiDBLite consensus disorder prediction 150 165 - -
Apr9g3097 732 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 22 713 - -
Apr9g3097 732 MobiDBLite consensus disorder prediction 169 191 - -
Apr9g3097 732 SMART tpr_5 472 505 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 640 673 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 430 463 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 598 631 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 348 381 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 556 589 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 515 548 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 390 423 IPR019734 GO:0005515
Apr9g3097 732 SMART tpr_5 306 339 IPR019734 GO:0005515
Apr9g3097 732 SUPERFAMILY TPR-like 233 335 IPR011990 GO:0005515
Apr9g3097 732 SUPERFAMILY TPR-like 555 698 IPR011990 GO:0005515
Apr9g3097 732 Pfam Tetratricopeptide repeat 599 666 - -
Apr9g3097 732 Pfam Tetratricopeptide repeat 435 458 IPR019734 GO:0005515
Apr9g3097 732 MobiDBLite consensus disorder prediction 12 49 - -
Apr9g3097 732 SUPERFAMILY TPR-like 309 583 IPR011990 GO:0005515
Apr9g3097 732 MobiDBLite consensus disorder prediction 1 90 - -
Apr9g3097 732 Pfam MalT-like TPR region 233 414 IPR041617 -
Apr9g3097 732 PANTHER KINESIN LIGHT CHAIN 22 713 - -
Apr9g3097 732 MobiDBLite consensus disorder prediction 116 198 - -
Apr9g3097 732 Gene3D Tetratricopeptide repeat domain 417 589 IPR011990 GO:0005515
Apr9g3097 732 Gene3D Tetratricopeptide repeat domain 590 720 IPR011990 GO:0005515
Apr9g3097 732 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3097 Apr-Chr9 37787614 37792500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3097 - - gmx:100813461 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0819 1 10435653 10439819 Apr9g3097 9 37787614 37792500 ECH
Apr9g3097 9 37787614 37792500 Apr9g3097 9 37787614 37792500 ECH
Apr9g3097 9 37787614 37792500 Apr1g0819 1 10435653 10439819 PCT