Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3017 ATGTCAAAGGTATTATTGTTGCTTTGTTTTCTAGCGGAGCTTCTGCTCCTTGCTCAGGCACATGAACATCACAAGATTGGATTTTATGAACTCAAGAGAGGAAATTTCATGCTGAATTTCACAAACTATGGTGCTACAATTATCTCTGTTATAACCCCTGACAAACACGGGAATTTAGCTGATATTGTTCTTGGCTACGATTCCATTCATTCTTACGAGAATGATACATGCTACTTCGGTGCCCTTATTGGACGTGTGGCAAATAGGATTGGAGGAGCTAAGTTCACTTTGGATGGCAAAACCTACAAATTGTCCGCAAATGATCACGGGAACACACTCCATGGTGGTATCAGAGGCTTCAGTGATGTTGTTTGGTCAGTGAAATCCCACAAAGAGGACAGTCATATAACATTTACCTACAACAGTTTTGAAAACGAAGAAGGATTTCCTGGGAAACTTAAGGTTTCTGTGACTTACATGTTCATTGGAACAAACAAATTGGGTGTGAAAATGATTGCCAAGCCGGTAGACAAAGCCACACCAGTGAATCTAGCTCAACATTCATACTGGAACCTTAGGGGCCACAACAGTGGTGACATTCTTTCTCACATTGTTCAGATATTTGGCTCACACATCACACCAGTGGACAAGGAACTCATTCCCACTGGCCAAATCCAACCTGTGAAGGGCACCCCATATGATTTTCTTGAACCAAAAGAAGTTGGAAGCCAGATTCATGAGCTTCCTGGTCTATATGACATGAACTATGTGCTTGACAAAAGAAGCAAAGAGCACTTAAGTAAGGTCGTTGTGGTGAGAGATCCTGTCTCTGGGAGAAATTTGGAGCTGTGGTCAAACCAAGTTGGTCTACAGTTCTATACTAGTGTCATGTTGAAAGATATCAAAGGCAAGGATGGAGCCATATACCACAAGCATGCAGGCATTGTCATGGAGACACAGGGTTTCCCAGATTCTGTGAACCACCCCAACTTTCCATCACAGGTTGTGAATCCTGGGGAGATTTACAAGCACTATATGCTTTACAGATTCACAGCTAGCTAA 1062 0.4237 MSKVLLLLCFLAELLLLAQAHEHHKIGFYELKRGNFMLNFTNYGATIISVITPDKHGNLADIVLGYDSIHSYENDTCYFGALIGRVANRIGGAKFTLDGKTYKLSANDHGNTLHGGIRGFSDVVWSVKSHKEDSHITFTYNSFENEEGFPGKLKVSVTYMFIGTNKLGVKMIAKPVDKATPVNLAQHSYWNLRGHNSGDILSHIVQIFGSHITPVDKELIPTGQIQPVKGTPYDFLEPKEVGSQIHELPGLYDMNYVLDKRSKEHLSKVVVVRDPVSGRNLELWSNQVGLQFYTSVMLKDIKGKDGAIYHKHAGIVMETQGFPDSVNHPNFPSQVVNPGEIYKHYMLYRFTAS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3017 353 Gene3D - 16 352 IPR014718 GO:0030246
Apr9g3017 353 PANTHER ALDOSE 1-EPIMERASE 3 353 - -
Apr9g3017 353 PIRSF GALM 16 353 IPR015443 GO:0016853|GO:0019318
Apr9g3017 353 SUPERFAMILY Galactose mutarotase-like 19 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Apr9g3017 353 Pfam Aldose 1-epimerase 29 349 IPR008183 GO:0005975|GO:0016853
Apr9g3017 353 CDD galactose_mutarotase_like 29 350 - -
Apr9g3017 353 PANTHER ALDOSE-1-EPIMERASE 3 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3017 Apr-Chr9 37018455 37020800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3017 1 352 Miscellaneous Gene Families AT3G47800 59.375 9.20e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3017 K01785 - gmx:100806956 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0899 1 12148900 12150636 Apr9g3017 9 37018455 37020800 ECH
Apr9g3017 9 37018455 37020800 Apr9g3017 9 37018455 37020800 ECH