Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2759 ATGGGTTGCCTGGTAAGGCTTCTGGGTCTGTGTTTATGGATTTACTTGGTAAGCTTAAGCTTCATTGGAGTTGGTGCTGTGTATGGAAGAGGAGGTGCTGCTGTGAAAGGGATTGTTTTAGTTCATGGGAAATCTTCTATTGGAAAGATTGATGATGATTTTGTCTGTGCCACTCTGGATTGGTGGCCTCCTCAGAAATGTGATTATGGAAAATGCAGTTGGGGTCATGCTTCTCTGCTCAATCTGGACCTCAACAACAAAATTTTGTTGAATGCAGTAAAAGCCTTTTCACCCTTAAAAATTAGATTAGGTGGGACTTTGCAAGATAAGGTCACATATGGGACAGAAGATAATCGGCAACCCTGTACTCCTTTTGTTTGGAGTGCTAATGAAATGTTTGGTTTCACTCAAGGGTGCTTACCAATGCATAGGTGGGATGAGCTAAACAGCTTTTTCCAAAAAGCAGGGGCTAAGGTTATCTTTGGATTAAATGCTCTTGCTGGAAGGTCTGTAAATTCTGGTTCTGCTGTTGGACCTTGGAACTACACTAATGCTGAATCTCTTATACGATACACCGTAGGAAAGAAGTACACCATTCATGGTTGGGAACTTGGCAATGAATTGTGTGGAAATGGAATTGGAGCAAGTGTTACTGCAGATCAATATGTTTCTGATGTAGCTGCTTTGAGAAACATAATTCAAAATGCATATAGAGGGATTGAGCCGAAGCCACTAGTCATTGCACCTGGAGGCTTCTTTGATTCAAATTGGTTTGGGGAATTTGTAACCAAATCTGGTAAATCTGCAAATGTGGTCTCCCACCACATTTATAACCTTGGGCCAGGAGTTGATGACCATTTAACTGAAAAAATTCTTGACCCTTCCTATCTGGATGGAGAGGCTAGCACATTCAGCAGCCTCAAAAGTATACTTCGAAGTCCACGAACCTCAGTAAAAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATCTGGATCAGCTTGGTATGTCAGCTATTTATGACACCAAAACATACTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTAAATACTAGTACTTTCATGCCAAATCCTGACTATTATAGTGCTCTTCTTTTCCACCGACTCATGGGAAGACGTGTCCTATCAACTAACTTCTTTGGGACAAAGAAGATAAGAGCTTATGCACACTGTGCAAAGGAATCCAAAGGAATCACAATACTATTACTGAACTTGGATAACAGCACCACTGTTCAAGTCAGAGCGGCCTTAAAATTTAACAAGTTACCCTACCGTCGTGTGGGAGAACCCTCCAGAAGAGAGTATCATTTAACAGCAAAGGACAGGGATTTGCATAGCCAAATCATGTTACTAAATGGAAAAATTTTAACTGTAAACTCAGCTGGTGAAATTCCTCCTTTCGAGCCTCTATATGTAGACTCATCAAAGCCAATAATAGTTGGTCCTCTCTCTATTGTATTTGCCCATATACCAAATGTTGTTCTTTCAGCTTGCAGCTAG 1575 0.4133 MGCLVRLLGLCLWIYLVSLSFIGVGAVYGRGGAAVKGIVLVHGKSSIGKIDDDFVCATLDWWPPQKCDYGKCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVTYGTEDNRQPCTPFVWSANEMFGFTQGCLPMHRWDELNSFFQKAGAKVIFGLNALAGRSVNSGSAVGPWNYTNAESLIRYTVGKKYTIHGWELGNELCGNGIGASVTADQYVSDVAALRNIIQNAYRGIEPKPLVIAPGGFFDSNWFGEFVTKSGKSANVVSHHIYNLGPGVDDHLTEKILDPSYLDGEASTFSSLKSILRSPRTSVKAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAIYDTKTYCRQSLIGGNYGLLNTSTFMPNPDYYSALLFHRLMGRRVLSTNFFGTKKIRAYAHCAKESKGITILLLNLDNSTTVQVRAALKFNKLPYRRVGEPSRREYHLTAKDRDLHSQIMLLNGKILTVNSAGEIPPFEPLYVDSSKPIIVGPLSIVFAHIPNVVLSACS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2759 524 Pfam Glycosyl hydrolase family 79, N-terminal domain 38 351 IPR005199 GO:0016020|GO:0016798
Apr9g2759 524 PANTHER HEPARANASE-RELATED 1 523 - -
Apr9g2759 524 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Apr9g2759 524 Gene3D Glycosidases 72 393 - -
Apr9g2759 524 PANTHER HEPARANASE-LIKE PROTEIN 3 1 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2759 Apr-Chr9 34515939 34519203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2759 31 524 Glycoside Hydrolase AT5G61250 47.013 4.46e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2759 K07964 - gmx:100778008 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2759 9 34515939 34519203 Apr9g2759 9 34515939 34519203 ECH
Apr9g2759 9 34515939 34519203 Apr1g2535 1 34916623 34920478 PCT