Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2535 ATGGGTTCTCGGATTCAGCTTCTGGGCATGTGTCTATGCTTGCACTTGGCAAGCTTTAGCTCCTCCTATGTGAACTCACTGAATGAAAGTGGAGATGAAGCTGTAAAAGGGAGTGTCATCATTGATGGCAAATCTGTGATTGGAAATATTGATGATGATTTTGTGTGTGCAACTTTGGATTGGTGGCCTCCAGAGAAATGTGACTATGGGAGATGCAGTTGGGGTCATGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTGTTAAATGCAGTTAAGGGCTTTTCACCTTTGAAACTTAGATTAGGTGGCAGTTTGCAAGATAAGCTAATATATGGCACTGAAGATAACCACCAACCATGCACTCCTTTTGTTAAGAACCCTTCTGAAATGTTTGATTTCACGCAAGGGTGCCTCCCAATGAATAGATGGGATGAACTCAACTACTTTTTCCAAAAAGCTGGGGCTAAGATTATCTTTGGATTAAATGCTCTTAATGGAAAATCAATTCACTCTGGTTCTGCAAAAGGACCTTGGAACTACACCAATGCTGAATCCTTTATTCGATACACGGTTGGAAAGAAATTCACCATTCATGGATGGGAACTTGGCAACGAATTAAGTGGGAATGGAGTTGGAACAAGTGTTGCTGCAGACCAATATGCTTCTGATCTTGCTGCTTTACGAGACATAGTTTACAACGCATATACAGAGATTGACCCTAAGCCACTAGTCATTGCACCTGGAGGTTTCTTTGATGCAACTTGGTTCAAGGAATTTATAAGCAAAACTGGAAAATCTTTGGATGTGGTCTCCCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTTGTGGAAAAAATTCTCAATCCTTCGTATCTTGATAAAGAGGCAAGCACATTCAAAGGCCTCAAAAATATACTTGAAAGTACAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCAGGAGGGGCTTACAATAGTGGACGTCATCTTGTGTCTGATGCATTTGTGTACAGTTTCTGGTACTTGGATCAGCTTGGCATGTCAGCTGCTTACGACACAAAAACATACTGCAGACAGAGTTTTATAGGAGGAAACTATGGTTTACTTAACACTACCAATTTCCTGCCAAATCCGGACTACTATAGTGCTCTCCTTTGGCACCGACTCATGGGAAGACACGTACTATCAACTACCTTCTCTGGGACAAACAAGATAAGAGCTTATGCACACTGTGCAAAACAATCTAAAGGAATCACTGTATTATTGATCAACCTGGACAACAACACAACTGTTGAAGCTGAAGTGACCTTCAGCAACAATAAGAGTTTGAGGCACAGAAAGATGTCTGATAATTTAAAAACGATGGAAGTATCTCTCTATAGTGGGAGTGAAACAGCAAGAGAAGAGTACCATCTAACACCACAGGATGGGAATATACATAGCCAAGTCATGGTACTAAATGGAAACGCTCTGAGTGTAAACTCAGATGGTGAAATTCCTTCTTTGGAGCCTCTACAAGTCAACTCATCAGAGCCAATAAGGGTTGCTTCTTTCTCTATTGTATTTGCCCATTTACCAGATGCTGCTGTTGCAGCTTGCAGCTAG 1620 0.416 MGSRIQLLGMCLCLHLASFSSSYVNSLNESGDEAVKGSVIIDGKSVIGNIDDDFVCATLDWWPPEKCDYGRCSWGHASLLNLDLNNKILLNAVKGFSPLKLRLGGSLQDKLIYGTEDNHQPCTPFVKNPSEMFDFTQGCLPMNRWDELNYFFQKAGAKIIFGLNALNGKSIHSGSAKGPWNYTNAESFIRYTVGKKFTIHGWELGNELSGNGVGTSVAADQYASDLAALRDIVYNAYTEIDPKPLVIAPGGFFDATWFKEFISKTGKSLDVVSHHIYNLGPGVDEHLVEKILNPSYLDKEASTFKGLKNILESTGTSATAWVGESGGAYNSGRHLVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSFIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSKGITVLLINLDNNTTVEAEVTFSNNKSLRHRKMSDNLKTMEVSLYSGSETAREEYHLTPQDGNIHSQVMVLNGNALSVNSDGEIPSLEPLQVNSSEPIRVASFSIVFAHLPDAAVAACS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2535 539 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
Apr1g2535 539 Gene3D Glycosidases 72 393 - -
Apr1g2535 539 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Apr1g2535 539 PANTHER HEPARANASE-LIKE PROTEIN 3 5 538 - -
Apr1g2535 539 PANTHER HEPARANASE-RELATED 5 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2535 Apr-Chr1 34916623 34920478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2535 31 539 Glycoside Hydrolase AT5G61250 46.628 1.93e-178 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2535 K07964 - gmx:100802477 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2535 1 34916623 34920478 Apr1g2535 1 34916623 34920478 ECH
Apr9g2759 9 34515939 34519203 Apr1g2535 1 34916623 34920478 PCT