Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2650 ATGGTTCGTTTCAGCAACAACCTGATTGGAATCTTGAACTTCCTCACCTTCCTCCTATCGATTCCCATTCTGGTGGCTGGTGTGTGGCTCAGCAAACAAGGCAGCAGCGAATGCGAGCGATGGCTCGAGAGACCCGTCATTGCTCTCGGCGTTTTCCTCATGGTGGTTTCACTCGCCGGGCTCATCGGCGCGTGTTGTCGCGTGTCGTGGCTCCTTTGGTTCTACCTCCTTGTCATGTTCTTGCTCATTGTTCTTCTCTTCGCTTTCACCATCTTCGCTTTCGTTGTTACCAACAAAGGCGCAGGTGAAGCTTTTTCTAATAGAGGATATAAGGAGTATAGGCTTGGGGATTACTCTAATTGGTTGCAGAAGAGGGTTAATAACACCAACACGTGGAACAGGATCAAGAGTTGTTTGCAGTCTGGGAAACTCTGTTCTGAATTCCAATCTAAATTTCTCAGCGACAACGTTGATAAATTCTATACCGAGAACTTGTCTGCGCTTCAGTCTGGATGTTGTAAACCTGCAGACGAGTGCCATTTTACCTATGAGAATCCAACTACATGGACTAAGGGACAGAATGCTACTTACACCAACCCTGACTGTGATGCTTGGAATAACGATCCCAACATTCTGTGCTTCAATTGCCAATCATGCAAGGCTGGCTTACTCCAAAACCTCAAGACTGACTGGAAGAAGGTGGCTATTGTGAACATCATAGTCTTGGTCTTCCTCATAATTGTCTATTCAATTGGTTGTTGTGCATTCAGGAATAACAGGAGGGACAATTGGAAGGGTCGTTAG 804 0.4614 MVRFSNNLIGILNFLTFLLSIPILVAGVWLSKQGSSECERWLERPVIALGVFLMVVSLAGLIGACCRVSWLLWFYLLVMFLLIVLLFAFTIFAFVVTNKGAGEAFSNRGYKEYRLGDYSNWLQKRVNNTNTWNRIKSCLQSGKLCSEFQSKFLSDNVDKFYTENLSALQSGCCKPADECHFTYENPTTWTKGQNATYTNPDCDAWNNDPNILCFNCQSCKAGLLQNLKTDWKKVAIVNIIVLVFLIIVYSIGCCAFRNNRRDNWKGR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2650 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Apr9g2650 267 PRINTS Transmembrane four family signature 7 30 - -
Apr9g2650 267 PRINTS Transmembrane four family signature 39 65 - -
Apr9g2650 267 PRINTS Transmembrane four family signature 66 94 - -
Apr9g2650 267 PANTHER TETRASPANIN-8-RELATED 1 267 IPR044991 GO:0009734|GO:0016021
Apr9g2650 267 PANTHER BNAA09G41810D PROTEIN 1 267 - -
Apr9g2650 267 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2650 Apr-Chr9 33668579 33671195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2650 1 267 Miscellaneous Gene Families AT2G23810 69.288 1.69e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2650 - - gsj:114382334 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2650 9 33668579 33671195 Apr9g2650 9 33668579 33671195 ECH
Apr9g2650 9 33668579 33671195 Apr1g2572 1 35200006 35201902 PCT