Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2572 ATGGTTCGAGTGAGCAACAATTTGATAGGGTTACTGAATTTTCTGACCCTTCTTCTGTCGATTCCGATTCTGATAACTGGCGTGTGGCTGAGTAAACAAGTCAACACCGACTGCGAAAGATGGCTCGAGAGACCCTTCATTGTGTTGGGCGTTTTCCTTTTGCTGGTGTCCCTCGCGGGTCTTGTGGGCGCGTGTTGCCGTGTCTCATGGCTCCTCTGGCTTTACCTTTTCGTTATGTTCCTTCTCATAATCGTTGTCTTTGCCTTCACCATCTTCACTTTTGTTGTGACCAATAAGGGTGCTGGTGAAGCCATTTCCAATAGAGGCTACAAGGAGTACAGGCTCGGTGATTACTCTAATTGGTTGCAGAAGAGAGTCAACAACAGCCACAACTGGAACAGGATTAGGAGCTGTCTTCAATCAGGAAAACTTTGCTCTCAGTTCCAAGCCCAATTCGCCAACGACACTGACCAACAATTCTATGCTGAAAACTTATCCGCACTTCAGTCTGGGTGTTGTAAGCCATCAAACGATTGCAATTTTGTGTACGAGGGTCCATCTAAGTGGAATAAAACGGAAGGTGTGAATTATTCCAATCCTGATTGTAATGCTTGGGATAATGACCCCAATGTTCTGTGCTTCAATTGCCAATCTTGCAAGGCTGGGTTATTGCAAAACCTTAAGACTGATTGGAAGAAGGTGGCTGTTGTCAACATCATATTCCTCGTCTGTCTCATTATTGTGTATTCTATTGGTTGCTGTGCATTCAGGAATAACAGGAGAGACAATTGGAAGTACTAG 801 0.4469 MVRVSNNLIGLLNFLTLLLSIPILITGVWLSKQVNTDCERWLERPFIVLGVFLLLVSLAGLVGACCRVSWLLWLYLFVMFLLIIVVFAFTIFTFVVTNKGAGEAISNRGYKEYRLGDYSNWLQKRVNNSHNWNRIRSCLQSGKLCSQFQAQFANDTDQQFYAENLSALQSGCCKPSNDCNFVYEGPSKWNKTEGVNYSNPDCNAWDNDPNVLCFNCQSCKAGLLQNLKTDWKKVAVVNIIFLVCLIIVYSIGCCAFRNNRRDNWKY* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2572 266 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Apr1g2572 266 PRINTS Transmembrane four family signature 7 30 - -
Apr1g2572 266 PRINTS Transmembrane four family signature 39 65 - -
Apr1g2572 266 PRINTS Transmembrane four family signature 66 94 - -
Apr1g2572 266 PANTHER TETRASPANIN-8 1 263 - -
Apr1g2572 266 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Apr1g2572 266 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2572 Apr-Chr1 35200006 35201902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2572 1 264 Miscellaneous Gene Families AT4G28050 65.530 1.03e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2572 - - gmx:100791287 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2650 9 33668579 33671195 Apr1g2572 1 35200006 35201902 PCT