Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2571 ATGGCCGTTTCTATGAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCTGCTCTTGAAATATGGCGTATTGAGAATTTTAATCCGGTTCCCGTCCCTCAGTCTTCTTATGGAAAGTTTTTCACCGGGGACTCCTATGTAATCTTGAAGTCAACTACTTCAAAAAGTGGTCTGCGTCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAGACAGTTGAGTTGGATGCAGCTTTAGGAGGACGGGCTGTTCAGTATCGTGAAGTGCAGGGTCATGAAACTGAAAAATTCCTATCTTATTTTAAACCATGTATCATACCTCAAGAAGGTGGAGTTGCCTCAGGTTTTAAACACGTTGAGGCTGAACAACATAAGACACGGTTGTTTGTATGCAAAGGGAAACATGTTGTACATGTCAAAGAGGTTCCTTTTGTTCGATCATCACTCAACCATGATGATGTTTTTATTCTGGATACTGAGTCCAAAATCTTCCAATTTAATGGTTCCAATTCAAGTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCACGATGGAAAATGTGAGATAGCTGCTATTGAGGATGGAAAGTTGATGGCTGATTCTGAAACCGGAGAATTCTGGGGTTGCTTTGGGGGCTTTGCTCCTCTTCCACGGAAAACAGTCAGTGATGATGATAAGCTTACTGATTCTCACCCTCCAAAGCTACTTTGTGTGGAAAAGGGGAAGGCAGAACCTATTGAAACCGACTCTTTGACAAAGGATTTACTGGACACAAACAAATGCTATATTCTCGATTGTGGGTTGGAAGTGTTTGCCTGGATGGGAAGAAGCACATCTCTGGATGAAAGAAAAAGTGCAAGTGGAACTGCAGATGAGTTAGTCAGTGTCACTAGTCGACCAAAGTCCCAAATAATTCGTGTAATTGAAGGATTTGAAACAGTAATGTTTAGGTCCAAGTTTGATTCTTGGCCCCAGGCAGCTCATGTAACAATGTCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTCTTGAAAGCTGAGCCAGTAAAAGAAGAACCTCAGCCCTACATAGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTCAAGAAAAGATTCTTCTTCCAGCCGCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAATATTCATATCCTGGAGATGATAAGGAAGAATATCTTGTAGGAACATGGATTGGAAAGACTAGCGTTGAGGAGGAGAGAGCTTCTGGTCTTTCACTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTATTCCTTCCCAGGCTTGTATATATGAAGGCAGTGAACCAATTCAATTTCATGCGATCCTCCAGAGCTTTATTGTTTTTAAGGGTGGACTTAGTGATGGATACAAGAATTATGTTGCGGAGAAGGAAATTCCAGATGAGACATACACTGAGGATGGTGTTGCATTATTTCGCATTCAGGGCTCTGGACCAGACAATATGCAAGCTATACAAGTGGAACCAGTTACTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCACAGTGGGCCTACTGTTTTTATTTGGTCCGGAAGTTTAACGACTTCAGATGACCAGGATCTTGTTGAGAGAATGCTGGATTTGATAAAGCCAGATTTTCAATGCAGACCGCAAAAGGAAGGTGCAGAATCTGAACATTTTTGGGATTTGTTAGGAGGGAAATCAGAATATCCCAGTCAAAAGATTGTGAGGGATGATGAAAATGACCCTCACCTATTTTCTTGCTACTTCTCAGAAGGTAAGGACTATTTTCTTGTCACAGAGATATACAACTTTTCACAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACTCTGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCAAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAACACTATCTCGTGAAACTCCAATATATATTGTCATGGAAGGTAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGACTCTGCAAAATCTGCAATGCTAGGAAACTCATTTCAAAGGAAGCTTGCAATTGTGAAAAATGGGGGTACGCCACTTTTGGTTAAACATAAACGAAGAGCATCGGTATCTTATGGGGGAAGGGTTGGTGGTGTGCCAGATAAATCCCAGCGTTCCCGCAGCATGTCCGTCAGTCCTGATCGTGTTCGTGTGAGGGGCAGATCTCCAGCCTTTAATGCACTGGCAGCAAATTTTGAGAACCCAGGTGTTAGGAACCTTTCAACTCCACCTCCAATGATTAGAAAACTGTACCCAAAATCAATGACACCAGATACATCAAAACTGGCACCTAAATCTTCAGCCATAGCTCGTCTTAGTTCAAGTTTTGAACTACATTCAGCACGAGAAAATTTGATTCCTAGGTCACTAAGAGGTATGCATTCAGCTACCCAGAAATCAAACCCCGAGACAAATGTCAAGGAAGATTCTATGAGCAGCAGAATAGAATCTCTTACTATACATGAAGATGTAAAAGAGGGTGAAGCTGAAGATGATGAAGGTCTCCCAATTTACCCATATGAACGCATTAACACAGCTTCTACAGATCCTGTAGCAGATATTGACGTGACTAGACGAGAGGTTTATCTGTCCTCTGCAGAGTTCCAAGAGAAATTAGGGATGGATAAGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCCGTTCAGTTGTTCTAA 2889 0.4157 MAVSMRDLDPAFKGAGQKAALEIWRIENFNPVPVPQSSYGKFFTGDSYVILKSTTSKSGLRHDIHYWLGKDTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEAEQHKTRLFVCKGKHVVHVKEVPFVRSSLNHDDVFILDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEIAAIEDGKLMADSETGEFWGCFGGFAPLPRKTVSDDDKLTDSHPPKLLCVEKGKAEPIETDSLTKDLLDTNKCYILDCGLEVFAWMGRSTSLDERKSASGTADELVSVTSRPKSQIIRVIEGFETVMFRSKFDSWPQAAHVTMSEDGRGKVAALLKRQGLDVKGLLKAEPVKEEPQPYIDCTGHLQVWRVNGQEKILLPAADQSKFYSGDCYIFQYSYPGDDKEEYLVGTWIGKTSVEEERASGLSLASKMVESMKFIPSQACIYEGSEPIQFHAILQSFIVFKGGLSDGYKNYVAEKEIPDETYTEDGVALFRIQGSGPDNMQAIQVEPVTSSLNSSYCYILHSGPTVFIWSGSLTTSDDQDLVERMLDLIKPDFQCRPQKEGAESEHFWDLLGGKSEYPSQKIVRDDENDPHLFSCYFSEGKDYFLVTEIYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLETLSRETPIYIVMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLAIVKNGGTPLLVKHKRRASVSYGGRVGGVPDKSQRSRSMSVSPDRVRVRGRSPAFNALAANFENPGVRNLSTPPPMIRKLYPKSMTPDTSKLAPKSSAIARLSSSFELHSARENLIPRSLRGMHSATQKSNPETNVKEDSMSSRIESLTIHEDVKEGEAEDDEGLPIYPYERINTASTDPVADIDVTRREVYLSSAEFQEKLGMDKNEFYKLPKWKQNKLKMAVQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2571 962 MobiDBLite consensus disorder prediction 855 878 - -
Apr9g2571 962 SUPERFAMILY Actin depolymerizing proteins 381 527 - -
Apr9g2571 962 Pfam Gelsolin repeat 640 713 IPR007123 -
Apr9g2571 962 Pfam Gelsolin repeat 268 336 IPR007123 -
Apr9g2571 962 Pfam Gelsolin repeat 149 215 IPR007123 -
Apr9g2571 962 Pfam Gelsolin repeat 28 110 IPR007123 -
Apr9g2571 962 CDD gelsolin_S4_like 385 484 - -
Apr9g2571 962 Gene3D Severin 613 736 IPR029006 -
Apr9g2571 962 Gene3D Severin 521 612 IPR029006 -
Apr9g2571 962 SMART VILL_6 622 720 IPR007122 GO:0051015
Apr9g2571 962 SMART VILL_6 136 233 IPR007122 GO:0051015
Apr9g2571 962 SMART VILL_6 19 116 IPR007122 GO:0051015
Apr9g2571 962 SMART VILL_6 391 488 IPR007122 GO:0051015
Apr9g2571 962 SMART VILL_6 253 343 IPR007122 GO:0051015
Apr9g2571 962 SMART VILL_6 518 605 IPR007122 GO:0051015
Apr9g2571 962 Gene3D Severin 247 354 IPR029006 -
Apr9g2571 962 CDD gelsolin_S3_like 253 342 - -
Apr9g2571 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Apr9g2571 962 MobiDBLite consensus disorder prediction 757 782 - -
Apr9g2571 962 PRINTS Gelsolin family signature 322 343 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 410 426 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 435 453 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 468 488 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 531 551 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 591 610 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Apr9g2571 962 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Apr9g2571 962 SUPERFAMILY VHP, Villin headpiece domain 888 962 IPR036886 GO:0003779|GO:0007010
Apr9g2571 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Apr9g2571 962 Gene3D Severin 132 246 IPR029006 -
Apr9g2571 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 254 426 IPR036180 -
Apr9g2571 962 Gene3D Severin 380 520 IPR029006 -
Apr9g2571 962 Gene3D Severin 7 131 IPR029006 -
Apr9g2571 962 CDD gelsolin_S2_like 137 231 - -
Apr9g2571 962 CDD gelsolin_S1_like 12 123 - -
Apr9g2571 962 SUPERFAMILY Actin depolymerizing proteins 128 245 - -
Apr9g2571 962 SUPERFAMILY Actin depolymerizing proteins 594 718 - -
Apr9g2571 962 SUPERFAMILY Actin depolymerizing proteins 510 611 - -
Apr9g2571 962 PANTHER VILLIN-4 1 962 - -
Apr9g2571 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Apr9g2571 962 MobiDBLite consensus disorder prediction 856 878 - -
Apr9g2571 962 CDD gelsolin_S5_like 516 607 - -
Apr9g2571 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Apr9g2571 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Apr9g2571 962 CDD gelsolin_S6_like 620 721 - -
Apr9g2571 962 SUPERFAMILY Actin depolymerizing proteins 9 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2571 Apr-Chr9 32909258 32921340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2571 - - gmx:100807762 1712.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2571 9 32909258 32921340 Apr9g2571 9 32909258 32921340 ECH
Apr1g2305 1 32578021 32591856 Apr9g2571 9 32909258 32921340 PCT