Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2305 ATGGCCGTTTCCATGAAAGATTTGGATCCAGCTTTCCAGGGAGCTGGCCAAAAGGCAGGACTTGAAATATGGCGTATTGAGAATTTTAATCCGGTTCCTGTTCCAAAGTCCTCTTATGGGAAGTTTTTCACAGGAGACTCCTATGTGATCTTAAAGACAACTGCATCAAAAAGTGGTGCTCTGCGCCATGACATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTACAAGGCCATGAAACAGAAAAATTCCTGTCTTATTTCAAACCATGTATTATTCCTCAAGAAGGTGGTGTTGCTTCTGGTTTCAAACATGCTGAGGCTGAAAAACACAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTAAAAGAGGTTCAATTTGCTCGATCTTCACTCAACCATGACGATATTTTTGTTCTGGATACTGAATCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAAGGGAAATGTGAGGTAGCTGCTGTTGAGGATGGGAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGAAAAACTGCTGGTGATGATGATAAGCCTGCTGATTCTCACCCTCCAAAGCTGCTTTGTGTTCAAAAGGGACAGGCAGAACCTGTTGAGACCGATTCTTTGGAGAGGGAACTACTAGACACAAACAAATGCTATATTCTTGATTGTGGTTTGGAAATGTTTGTCTGGATGGGAAGGAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTAGTCAGTGGCACTGATCAACTGAAACCCCAAATAATTCGTGTTATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAATTTGGTTCTTGGCCTCAGACAACTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCTGCACTTCTAAAACGTCAAGGAGTAAATGTAAAGGGTTTGTTGAAAGCTGATCCTGTTAGGGAAGAACCCCAACCCTACATTGATTGCACAGGACATTTGCAGGTTTGGCGAGTGAATGGTCAGGAAAAGATTCTTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGGGATTGCTACATCTTTCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATAGGAACCTGGATTGGAAAGAATAGTGTTGAGGAAGAAAGAGCTTCAGCTAATTCATTGGCAAGCAAAATGGTCGAGTCAATGAAGTTTCTGGCTTCTCAGGCTCGTTTATATGAAGGCAATGAACCAGTTCAATTTCATTCAATCCTCCAAAGCTTCATTGTTTTTAAGGGTGGGCTTAGTGATGGATACAAAAATTACATTTCCGAAAAGGAAATTCCTGACGAGACATACAATGAGAATGCTGTTGCATTATTTCGCATCCAGGGCTCTGGTCCAGACAATATGCAAGCCATACAAGTTGAATCAGTTGCATCTTCCTTGAATTCCTCCTATTGTTACATACTTCATAATGGGCCTGCTGTGTTTACTTGGTCTGGAAGCTCTACAAGTGCAGAAGATCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTTCTGAATCTGAACAGTTTTGGGACTTGTTAGGAGGGAAATCAGAATATGCCAGTCAAAAGATTCTAAGGGAGGCTGAAAGTGATCCTCACTTATTTTCTTGTCAATTCTCAAAAGGAAATTTAAAGGTGACAGAGGTATACAATTTCTCCCAGGATGATTTGATGACAGAGGACATTTTCATCTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACCCTAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGGAGTGAGCCACCTTTCTTCGCTCGCTTCTTTAAATGGGATTCTGCCAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATTGTGAAAAGTGGGGGTGCTCCACTTTTGGATAAACCCAAGCGGAGAACACCAGTATCTTATGGGGGAAGGTCAAGTAGTGTGCCAGATAAATCCCAGCGTTCATCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGGGTGAGGGGCAGGTCTCCAGCCTTTAATGCACTGGCAGCTAATTTTGAGAACCCTAATGCTAGGAACCTTTCAACTCCACCTCCAGTAATTAGAAAGCTGTATCCAAAATCTGTGACACCAGATTCTGCAATACTGGCACCAAAATCTGCAGCCATAGCTGCACTTAGTTCTACTTTTGAACAACCACCTTCAGCACGAGAAAGCTTGATACCTCGGTCACTTAAAGTGAGTCCAATTACACCCAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCTGTGAGCACCAGAGTGGAATCTCTTACCATACAGGAGGATGTGAAAGAAGGTGAAGCTGAAGATGAGGAAGGTCTTGTGATTTATCCATATGATCGTGTTAAAATAACATCCACAGATCCTGTAACAGACATTGATGTGACTAAGCGAGAGACTTATTTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGTCGAAGGATGCATTTTACAAGTTGCCGAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAGTTATTCTGA 2889 0.4188 MAVSMKDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEKHKTRLFVCRGKHVVHVKEVQFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTAGDDDKPADSHPPKLLCVQKGQAEPVETDSLERELLDTNKCYILDCGLEMFVWMGRNTSLDERKSASGAADELVSGTDQLKPQIIRVIEGFETVMFKSKFGSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPYIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARLYEGNEPVQFHSILQSFIVFKGGLSDGYKNYISEKEIPDETYNENAVALFRIQGSGPDNMQAIQVESVASSLNSSYCYILHNGPAVFTWSGSSTSAEDQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYASQKILREAESDPHLFSCQFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVVMEGSEPPFFARFFKWDSAKSAMLGNSFQRKLTIVKSGGAPLLDKPKRRTPVSYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVIRKLYPKSVTPDSAILAPKSAAIAALSSTFEQPPSARESLIPRSLKVSPITPKSNPEKNDKENSVSTRVESLTIQEDVKEGEAEDEEGLVIYPYDRVKITSTDPVTDIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMAVQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2305 962 MobiDBLite consensus disorder prediction 741 782 - -
Apr1g2305 962 SUPERFAMILY Actin depolymerizing proteins 137 238 - -
Apr1g2305 962 CDD gelsolin_S5_like 517 608 - -
Apr1g2305 962 Gene3D Severin 6 132 IPR029006 -
Apr1g2305 962 CDD gelsolin_S2_like 138 223 - -
Apr1g2305 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Apr1g2305 962 Gene3D Severin 517 613 IPR029006 -
Apr1g2305 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Apr1g2305 962 SMART VILL_6 622 719 IPR007122 GO:0051015
Apr1g2305 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Apr1g2305 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Apr1g2305 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Apr1g2305 962 SMART VILL_6 254 344 IPR007122 GO:0051015
Apr1g2305 962 SUPERFAMILY VHP, Villin headpiece domain 887 962 IPR036886 GO:0003779|GO:0007010
Apr1g2305 962 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Apr1g2305 962 Gene3D Severin 388 501 IPR029006 -
Apr1g2305 962 SUPERFAMILY Actin depolymerizing proteins 511 614 - -
Apr1g2305 962 CDD gelsolin_S3_like 254 341 - -
Apr1g2305 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Apr1g2305 962 Gene3D Severin 133 246 IPR029006 -
Apr1g2305 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Apr1g2305 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Apr1g2305 962 PANTHER VILLIN-3-LIKE 1 962 - -
Apr1g2305 962 Gene3D Severin 614 733 IPR029006 -
Apr1g2305 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Apr1g2305 962 Pfam Gelsolin repeat 637 712 IPR007123 -
Apr1g2305 962 Pfam Gelsolin repeat 266 337 IPR007123 -
Apr1g2305 962 Pfam Gelsolin repeat 150 217 IPR007123 -
Apr1g2305 962 Pfam Gelsolin repeat 410 474 IPR007123 -
Apr1g2305 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Apr1g2305 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 256 427 IPR036180 -
Apr1g2305 962 MobiDBLite consensus disorder prediction 842 882 - -
Apr1g2305 962 CDD gelsolin_S4_like 386 485 - -
Apr1g2305 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Apr1g2305 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Apr1g2305 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Apr1g2305 962 CDD gelsolin_S1_like 12 124 - -
Apr1g2305 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Apr1g2305 962 MobiDBLite consensus disorder prediction 755 777 - -
Apr1g2305 962 CDD gelsolin_S6_like 621 720 - -
Apr1g2305 962 Gene3D Severin 247 356 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2305 Apr-Chr1 32578021 32591856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2305 - - gmx:100808499 1791.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2305 1 32578021 32591856 Apr9g2571 9 32909258 32921340 PCT