Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2566 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAAGCAGTGAAACTTTGTAAAGATAGAAAGAGATTCATTAAACAAGCTGTTGAGCAAAGAACTCTATTTGCTAGTGGACATGTAGCATACATCCAATCTTTGAGAAGGGTTTCAGCTGCTCTTTGTGATTACTTTGAAGGTGATGAGTGTCATGAGTTCTCATTGGATTCAATCGTAACCCCACCTTTCACTCCTGTCAAGAAAACTACTACTCCTGCCACTACCTTCATTCCCATATCATCAAAATCCTTCACCCCAACAACAATTGAGTTTGGACCCAAAACAACTCTGAAAGTGAATTACCTAAGGCCAGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCACCGGAAACGGTTCGAGTTGAAATGAATTATTTTCCCATGCACCAGTTTGGCATTGATGGCTTTTATAATATGCAATCCTCACCTATGAATCCCTCAATTTTTGCTTATTCTCCCATAAACAGGCCTAATATCCCTCCCCCTTCACCTCAATCTACTCAATGGGAATCCTTCTGGAACCCATTTTCATCATTAGACTATTATGGTTACCCCACCAGAAGTAGCCTTGACCACACTGTTATGGATGATGAGATCAGAGGACTGAGGCAGGTCAGAGAACAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACAAGAAGACATTGCTGACAAGAGAAATGTAGCCGAAGAAAGAACCAAAATTGATATAAACTCCTCCAAAGAAGAAGTCATGGTTGAAGATGTTAATGAGGAGGAGGAGGAGGAGGAAGAGGAGGGAACAGATGTTGTTGAAACAAGAACTGCACATGAAGTCTCAGACTCGCAAGCCAATGGAAGTGAATGTTTTCAAGTATCAAAAGCTCAAACTACGGGTCAGGAATTGGAAGTTGGTAATCAAGAAGCTCAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACAGAAGGCCAACAAGCATGGCTGAAGTGATCAGAGATCTTGATGCTCAATTCACAATAGTCTGCAATGCAGCCAATGATCTATCATCACTGTTAGAGGCCAAGAAAGCGCAGTATTTATCAACATCTAATGAGCTGTCAGCATCAAAGTTGTTAAACCCTGTAGCTTTGTTCCGCTCAGCTTCTTCACACTCATCCTCATCAAGATTTTTAATGAATTCTTCAAGCACGGGGGATGAAGGATTTGAAGGCACTGATGATCTGTCAGAAGAAAATTGTTCGTTTGCTGTTAGTCATCAATCTACACTAGACAGATTATATGCTTGGGAAAAGAAGCTCTATGAGGAAGTCAAGTCTGGAGAACGTGTTCGAATTGCATATGAGAAGAAATGTCAGCAACTCAGGAACCATGATGTGAATGGAGAGGAACCCTCTTATGTGGATAAAACAAGAGCAACCATTAGAGATCTTCAGACCCAACTAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAGCTTCATCAATTAATGCAAGGGCTGGCAAAGATGTGGAAAGTGATGGCAGAATGTCATGAGACACAAAAGAGAACTTTAGATGAAGCTAAGATTCTTCTAGCTTACACAGATGCCAGAAAACAGTGCGCCAGATCAATAACTGATCCACAAAGGCTTGCTCGTTCTTCCTCCAATCTTGAAACTGAATTGAGAAATTGGCGAAACACCTTTGAGTCGTGGATCACATCTCAAAGATCCTATATTCATGCTCTAACTGGATGGCTTCTAAGATGTGTTACATGTGAGCCTGATCCATCAAAGTTAGCATGCTCTCCTCGTAGGTCCAGTGGCACACACCCATTATTTGGACTCTGTGTTCAGTGGTCAAGGCGTCTAGATGCCATCCAAGAAACAGCAGTGCTTGATGCCATAGACCTTTTTGCAGCTGGTATAGGGTCCCTTCATGCACAACAGCTAAGGGAAGATTCTCGAAGAAATCAAGTTGGATCAAATGATAATATGCAAATGGTGGAAGTTGGTGGTGAAGTAGAAGAGGTAATGACTACTGAGAAATTGGTTGATGTTGCTATTAAGGTACTTTGTGCTGGTATGTCAACTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACAATGAACTCGTTAAGAAATGGGAGAATGTTAACTTGCAGCACATTTCTTGTGGGACTGGAACTTAG 2256 0.4158 MGCSQSRLDDEEAVKLCKDRKRFIKQAVEQRTLFASGHVAYIQSLRRVSAALCDYFEGDECHEFSLDSIVTPPFTPVKKTTTPATTFIPISSKSFTPTTIEFGPKTTLKVNYLRPGGNPAISVEERPQSPETVRVEMNYFPMHQFGIDGFYNMQSSPMNPSIFAYSPINRPNIPPPSPQSTQWESFWNPFSSLDYYGYPTRSSLDHTVMDDEIRGLRQVREQEGIPDLEEDETEQEDIADKRNVAEERTKIDINSSKEEVMVEDVNEEEEEEEEEGTDVVETRTAHEVSDSQANGSECFQVSKAQTTGQELEVGNQEAQEETPGFTVYVNRRPTSMAEVIRDLDAQFTIVCNAANDLSSLLEAKKAQYLSTSNELSASKLLNPVALFRSASSHSSSSRFLMNSSSTGDEGFEGTDDLSEENCSFAVSHQSTLDRLYAWEKKLYEEVKSGERVRIAYEKKCQQLRNHDVNGEEPSYVDKTRATIRDLQTQLTVSIHSVEAISRRIETLRDEELHPQLHQLMQGLAKMWKVMAECHETQKRTLDEAKILLAYTDARKQCARSITDPQRLARSSSNLETELRNWRNTFESWITSQRSYIHALTGWLLRCVTCEPDPSKLACSPRRSSGTHPLFGLCVQWSRRLDAIQETAVLDAIDLFAAGIGSLHAQQLREDSRRNQVGSNDNMQMVEVGGEVEEVMTTEKLVDVAIKVLCAGMSTAMSSMAEFAVDYAEGYNELVKKWENVNLQHISCGTGT* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2566 751 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Apr9g2566 751 MobiDBLite consensus disorder prediction 222 246 - -
Apr9g2566 751 Coils Coil 228 248 - -
Apr9g2566 751 Pfam Protein of unknown function (DUF632) 336 659 IPR006867 -
Apr9g2566 751 PANTHER UNCHARACTERIZED 1 745 - -
Apr9g2566 751 Coils Coil 255 275 - -
Apr9g2566 751 MobiDBLite consensus disorder prediction 262 278 - -
Apr9g2566 751 MobiDBLite consensus disorder prediction 259 282 - -
Apr9g2566 751 PANTHER DUF630 FAMILY PROTEIN 1 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2566 Apr-Chr9 32869865 32873510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2566 1 231 Acyl Lipid Metabolism Gene Families AT2G27090 26.971 1.92e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2566 - - gmx:100818631 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2566 9 32869865 32873510 Apr9g2566 9 32869865 32873510 ECH
Apr9g2566 9 32869865 32873510 Apr1g2309 1 32661908 32667127 PCT