Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2309 ATGGGATGTTCACATTCAAGGCTTGATGACGAAGAAGCAGTGCAGCTTTGTAAAGATAGGAAAAGGTTCATCAAACAAGCTGTTGAACAAAGAACCCTATTTGCCACAGGACACATAGCGTACATAGAATCTCTGAAGAGAGTTTCAGCAGCACTTCGTGATTACATTGAAGGTGATGAGCCTCGTGAGTTCTCATTGGACTCAGTTATCACCCCACCATTCACACCTGTCAAGAGAACTACCCCTGCCTTCATTCCCATATCAGCAAAACCCTTCACACCAACAACGGCAATTGAGTTTGGTGTTGGACCAAACTCTACTTTGAAAGTGAACTACCTTAGGCCAGGTGGTAATCCTGCAATTTCAGTTGAGGAAAGGCCTCAGTCACCTGAAATGGTTCGGGTGGAGACATATCCTCCAATGCAGCACTATGGCATTGATGGATTCTTCAACATGCAATCATCACCTGCGAACCCCTCAATTTTTGCTTACTCTCCCAATAATAGGCCCAACATCCCTCCCTCTTCACCTCAGGCTTCTCAGTGGGACTTCTTTTGGAACCCCTTTTCATCATTGGACTACTATGGTTATCCTGCAAGGAGTAGCCTTGAGCACGCTGCTATGGATGATGAATACAAAGGACTTAGGCAGGTTAGAGAAGAAGAGGGAATACCTGACTTGGAAGAAGATGAAACTGAGCAAGAATACTATGTTGGGAAGAGAAATGTAGCAGAAGAAAGAACTAGAAATGATGTAAATTCTTCCAAAGAAGAAGTCATTGTTGAAGATGTTGATGATGAGGATGAGGATGAGGATGAGGAGGAGGACGACGAGGAGGAAGAGGAAGAGGAGGGAACAGACATTGAAATTGAAAATAAAACAGACCTTGGAGCTAATAATTCACAAGCTCATGGTAGTGTAAGTTTTGATGTGTCAAAAGCTCAAACTGCAGGTCATGTTGAGTCCAGCCATAGAGAAATGGCAGTTGGTAAACAAGAAGCTAAGGATGAAACACCAGGCTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAGCTCAATTCACAATTGTTTGCAATGCAGCCAATGATGTCTCGGCATTGTTAGAGGCCAAGAAATCTCAGTATTTATTGACATCTAATGAACTATCAGCATCAAAATTGTTGAACCCGGTAGCTTTGCTCCGCTCTGCTTCTTCACGCTCTTCGTCATCAAGATTTTTAATGAATAATTCAAGCACTAGAAAGGAAGGTTGTGATGGAACTAAGGATCTCTCTGAGGAACATTGTATGTTATCCGGTAGTCACCAATCCACATTGGACAGATTAAATGCATGGGAGAAGAAGCTCTATGAGGAAGTGAAGTCTGGAGAACGTGTCCGAATTGCTTATGAGAAGAAATGCAAGCAACTCAGGAACCTTGATGTAAAAGGAGAGGACCCCTCCTGTGCAGATAAAACAAGATCAGCTATTAGAGATCTAGACACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCAAGGAGAATTGAAACTCTAAGGGACGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGCTAGAAAGGATGTGGAAAGTGATGGCAGAGTGTCATCAGACACAGAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACCCCTTCTAAATCACATGCCAGAAAGCACTCTTCCATTTCAATGACTGATCCAAACCGGCTTGCACGTTCAGCCTCGAATCTCGAATCCGAGTTAAGGAACTGGAGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATTCATTAACTGGATGGCTTCTTAGGTGTGTGAGATCTGAGCCTGATGCATCAAAGCTACCATGCTCTCCTCATAGGTCCAGTGGCACTCACCCTTTATTTGGACTGTGTGTTCAATGGTCAAGACGTTTAGATGCCATACATGAAAAAGCAGTGCTTGATGGCTTAGACTTTTTTGCAGCTGGAATGGGGTCCCTCTATGCACATCAATTAAGAGAAGATTCTAGGAGAAACTCATTTGGATCAAAACAAAGTTATGGGAATATGGAAATGGTGGAAGTTGGTGAGGTGGAAGATGTGGTAATGGCTCCAGAGAAACTAGCTGAAGTTGCTATTAAGGTTCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTTCTTTGGATTCTGCTGAAGGGTACAATGAAGTTGTTAAGCAATGGGAAAATGTCAAGTGTCAACAACATACTTCTAGTGAGGCTAGAACATCATAG 2331 0.4277 MGCSHSRLDDEEAVQLCKDRKRFIKQAVEQRTLFATGHIAYIESLKRVSAALRDYIEGDEPREFSLDSVITPPFTPVKRTTPAFIPISAKPFTPTTAIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPEMVRVETYPPMQHYGIDGFFNMQSSPANPSIFAYSPNNRPNIPPSSPQASQWDFFWNPFSSLDYYGYPARSSLEHAAMDDEYKGLRQVREEEGIPDLEEDETEQEYYVGKRNVAEERTRNDVNSSKEEVIVEDVDDEDEDEDEEEDDEEEEEEEGTDIEIENKTDLGANNSQAHGSVSFDVSKAQTAGHVESSHREMAVGKQEAKDETPGFTVYVNRRPTSMAEVINDLEAQFTIVCNAANDVSALLEAKKSQYLLTSNELSASKLLNPVALLRSASSRSSSSRFLMNNSSTRKEGCDGTKDLSEEHCMLSGSHQSTLDRLNAWEKKLYEEVKSGERVRIAYEKKCKQLRNLDVKGEDPSCADKTRSAIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLERMWKVMAECHQTQKRTLDEAKILLAGTPSKSHARKHSSISMTDPNRLARSASNLESELRNWRNTFESWITSQRSYIHSLTGWLLRCVRSEPDASKLPCSPHRSSGTHPLFGLCVQWSRRLDAIHEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGSKQSYGNMEMVEVGEVEDVVMAPEKLAEVAIKVLCAGMSVAISSLAEFSLDSAEGYNEVVKQWENVKCQQHTSSEARTS* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2309 776 Coils Coil 264 284 - -
Apr1g2309 776 MobiDBLite consensus disorder prediction 260 289 - -
Apr1g2309 776 PANTHER UNCHARACTERIZED 1 775 - -
Apr1g2309 776 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Apr1g2309 776 PANTHER DUF630 FAMILY PROTEIN 1 775 - -
Apr1g2309 776 MobiDBLite consensus disorder prediction 247 304 - -
Apr1g2309 776 Pfam Protein of unknown function (DUF632) 352 679 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2309 Apr-Chr1 32661908 32667127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2309 1 230 Acyl Lipid Metabolism Gene Families AT2G27090 27.426 6.81e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2309 - - gmx:100780704 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2309 1 32661908 32667127 Apr1g2309 1 32661908 32667127 ECH
Apr9g2566 9 32869865 32873510 Apr1g2309 1 32661908 32667127 PCT