Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2564 ATGAAGACAGCAAAAGTTTGGCGTCTAGGCATGGGAGATATGCAGATACTGTCTGGGCCACGCCACCGTCCTCACATGAAGAAGCCTATGTGGATTATTATCTTGGTGTTGTTTGTATGCGTCTTTCTGATCTGTGCGTATATCTACCCACCGCAGAGCAGGTCAGCCTGCTATGTCTTCTCTTCTAGAGGATGCAAGGGTTTTGTTAATTGGCTACCACCTATACCTGCAAGAGAATATACTGATGAGGAGATTGCGTCACGTGTTGTGATTAAGGATATTTTGAACTCACCACCAATTGTTTCCAAAAGTTCAAAAATTGCCTTCATGTTTTTGTCACCTGGTTCTTTGCCGTTTGAAAAACTGTGGGACAAGTTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCCAAGACTAAACCAGTTCATGTGAGCCGTTATTTTGTTAATCAGGATATACGCAGTGATCAGGTTGTGTGGGGGAAAATTTCTATGGTTGATGCAGAGAGACGGCTATTGGCAAATGCCCTTCAAGATCCTGACAACCAGCAATTTGTTTTATTGTCTGATAGCTGTGTGCCTCTGTATCATTTTGACTATATTTATAACTATCTGATGAATACGAATATCAGCTTTGTAGACTGCTTTAAGGATCCTGGTCCTCATGGCAATGGGAGGTATTCAGATCGCATGTTACCAGAAGTTGAGGTGAAGGACTTTAGAAAGGGTGCACAGTGGTTTTCTTTGAAACGGCAGCATGCAATTATAGTCATGGCTGATAGTCTGTACTACTCAAAATTTCGGGCTTACTGCCAGCCTGGTTTGGAGGGCAGGAATTGCATTGCCGATGAGCATTACTTGCCGACCTTCTTCCAGATGGTTGATCCTGGTGGAATTGCAAACTGGTCAGTCACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATAGGGCTCAGGATGTCACTTATGAGCTTTTAAAGAATATAACGTCCATTGATGTTAGTGTACATGTCACCAGTGATGAGAAGAAAGAAGTGCAACGTTGGCCTTGCTTATGGAATGGGGTTCAGAAGCCATGTTACCTATTTGCTAGGAAATTCACTCCTGAAACACTGAATAATTTGTTGCATGTACTTTCTAATTATTCAAAACCTTAA 1179 0.4207 MKTAKVWRLGMGDMQILSGPRHRPHMKKPMWIIILVLFVCVFLICAYIYPPQSRSACYVFSSRGCKGFVNWLPPIPAREYTDEEIASRVVIKDILNSPPIVSKSSKIAFMFLSPGSLPFEKLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNQDIRSDQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYHFDYIYNYLMNTNISFVDCFKDPGPHGNGRYSDRMLPEVEVKDFRKGAQWFSLKRQHAIIVMADSLYYSKFRAYCQPGLEGRNCIADEHYLPTFFQMVDPGGIANWSVTHVDWSERKWHPKSYRAQDVTYELLKNITSIDVSVHVTSDEKKEVQRWPCLWNGVQKPCYLFARKFTPETLNNLLHVLSNYSKP* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2564 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
Apr9g2564 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 391 IPR044174 GO:0016757
Apr9g2564 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2564 Apr-Chr9 32821228 32828370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2564 - - gmx:100817202 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2564 9 32821228 32828370 Apr9g2564 9 32821228 32828370 ECH
Apr9g2564 9 32821228 32828370 Apr1g2313 1 32745811 32752753 PCT