Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2313 ATGAAGACAGAAAAAGTTTGGCGCCTAGGCATGGGCGATATGCAGATCATGCCTGGGTCTCGTCATCGTCCTCCCATGAAGAAGCCAACGTGGATTATTATATTGGTTCTATTTGTGTGCTTGTTTCTGATATGTGCTTATATCTACCCGCCAAAAAGCAGTTCAGCTTGTTACATCTTTTCTTCTCGAAGGTGCCAGTCTATTGCTGATTGGCTTCCTCCTGCTCCTGCAAGGGAATATACAGATGATGAGATTGCATCACGTGTTGTTATTAGGGATATTTTGAGCACACTACTGATTCATTCAAAAAATCCAAAAATTGCCTTCATGTTTTTGACGCCTGGTTCTCTACCATTTGAAAAATTGTGGGATAAATTTTTCCAAGGACATGAAGGGAAATTCTCTGTTTATGTGCATTCATCTAAGACTAAACCAGTTCATGTGAGCAGATATTTTGTTAATCGGGATATACGCAGTGACCAGGTGGTGTGGGGTAAAATATCTATGGTTGATGCAGAGAGACGACTTCTGGCAAATGCTTTACTAGATCCTGATAACCAGCAATTTGTTTTACTGTCTGATAGCTGTGTGCCACTGTATAGTTTTGACTATATTTTCAATTATCTGATGCATGCAAATATCAGCTTTGTGGACTGCTTTAAGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACGCATGTTACCCGAAGTTGAGATGAAGGACTTTAGAAAGGGTGCACAGTGGTTTTCGATGAAGCGGCAGCATGCTATTATAGTTATGGCTGACAATCTGTATTACTCAAAATTTCATGCATACTGTCAGCCTGGTTGGGAAGGGAAGAATTGCATTGCGGATGAGCATTACTTACCTACCTTCTTCCAGATTGTCGATCCTGGTGGAATTGCAAACTGGTCGGTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATACAGGCCTCAGGATGTTACGTATGAGCTTTTGAGGAATATTACGTCCATTGATGTTAGTGTTCACGTCACCAGTGATGAGAAGAGAGAAGTTCAAAGTTGGCCTTGCTTATGGAATGGGATTCAGAAGCCGTGTTATCTATTTGCTAGAAAATTCACTCCCGGAACATTGGAAAATTTGTTACATCTTTTTTCTAATTATTCATCACCTTGA 1179 0.4088 MKTEKVWRLGMGDMQIMPGSRHRPPMKKPTWIIILVLFVCLFLICAYIYPPKSSSACYIFSSRRCQSIADWLPPAPAREYTDDEIASRVVIRDILSTLLIHSKNPKIAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHSSKTKPVHVSRYFVNRDIRSDQVVWGKISMVDAERRLLANALLDPDNQQFVLLSDSCVPLYSFDYIFNYLMHANISFVDCFKDPGPHGNGRYSERMLPEVEMKDFRKGAQWFSMKRQHAIIVMADNLYYSKFHAYCQPGWEGKNCIADEHYLPTFFQIVDPGGIANWSVTHVDWSERKWHPKSYRPQDVTYELLRNITSIDVSVHVTSDEKREVQSWPCLWNGIQKPCYLFARKFTPGTLENLLHLFSNYSSP* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2313 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
Apr1g2313 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 391 IPR044174 GO:0016757
Apr1g2313 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2313 Apr-Chr1 32745811 32752753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2313 - - gmx:100817202 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2313 1 32745811 32752753 Apr1g2313 1 32745811 32752753 ECH
Apr9g2564 9 32821228 32828370 Apr1g2313 1 32745811 32752753 PCT