Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2561 ATGGAGGTGCCAAAAGGGAAGAATGAAACCAAAATTGTTTTGACAAAGCCCTTCTCATTGGAAGGTGAATCAGACTTAGATCCATCTTATAGAGCTCCCAATCTCCTAAGTCGCTTGTTAAGTCTACTCAAGAATGTGCGGCCGGGATCAGATCTCACAAACTTCCAGCTGCCACCTCTGTTCAATTTCCCCAAATCTCAACTACAATGCTATGGTGAATCAGTGTACTGCACATCTGAGAACTTGCTTAGTAAATGCAACAGTGGGGAGGGTCCAATAGACAGGTTCACATCCGTAGTAGCATGGAGCATATCTACCACGCGCCCTGCATCTTTTGGGGTTGCTCCTTATAATCCCACTCTTGGAGAGACCCACCATGTTTCTAAGGGCAATCTCAACGTACTACTGGAGCAGGTTTCACTCGACCCGCCAGTATCTGCTCTTCATGCAACGGATGAGAAGGAAAACATCGAAATGATATGGTGCCAGCAAACTGCTCCCAAGTTTCGTGGTACATCTATAGAAGCTCGAGTGCATGGTAAACGGTTGCTGAAGCTCCAAAATCATAGGGAAACATATGAAATGAATAGTCCTCACCTTTCAATTAGAATTCTTCCTGTTCCGGGTGTTGATTGGGTTGGCAATGTTACTATACGGTGTCTAGAGACAGGCCTGGAGGCTGAGTTATCCTACACATCAAGTCGTTCTTTTCTAGGAGTTGGAGGAAATCGTAAATTGATCAAAGGGAAGATCGTTGACACATCATTATTTAAAGTTCTATATGAAGTTGATGGCCATTGGGATAGGATTGTTAAAGTAAAAGATACAAATAGTGGGGAAATCAGAGTGATATACGACGCAAAAGAGGTCATATCAGGGCTCAAAGTTCCTATTGTCAAGGATGCGAAGAGTGTGTGGACAACAGAATCAGCACATGTTTGGAGTGAGTTGAGCGAAGCCATCATGAGTAAAGAGTGGGAGAAAGCAAAAGAAGCAAAGGAACGCGTGGAGGAAAGACAGAGGAAGATACTGAGAGAAAGAGACATAAAAGGGGAAAGTTGGATTCCCAAGAATTTTATATTATATCACAGTAAAGACAGGTTAGAATGGAACTGTTCACCCATTCAAAAATTAGTCCCTCCTGCCCCCATCATAGCCCCCTAA 1164 0.4347 MEVPKGKNETKIVLTKPFSLEGESDLDPSYRAPNLLSRLLSLLKNVRPGSDLTNFQLPPLFNFPKSQLQCYGESVYCTSENLLSKCNSGEGPIDRFTSVVAWSISTTRPASFGVAPYNPTLGETHHVSKGNLNVLLEQVSLDPPVSALHATDEKENIEMIWCQQTAPKFRGTSIEARVHGKRLLKLQNHRETYEMNSPHLSIRILPVPGVDWVGNVTIRCLETGLEAELSYTSSRSFLGVGGNRKLIKGKIVDTSLFKVLYEVDGHWDRIVKVKDTNSGEIRVIYDAKEVISGLKVPIVKDAKSVWTTESAHVWSELSEAIMSKEWEKAKEAKERVEERQRKILRERDIKGESWIPKNFILYHSKDRLEWNCSPIQKLVPPAPIIAP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2561 387 Pfam Oxysterol-binding protein 41 363 IPR000648 GO:0008289
Apr9g2561 387 Gene3D - 118 298 - -
Apr9g2561 387 Gene3D - 307 377 - -
Apr9g2561 387 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 385 IPR000648 GO:0008289
Apr9g2561 387 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 385 - -
Apr9g2561 387 SUPERFAMILY Oxysterol-binding protein-like 36 370 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2561 Apr-Chr9 32796199 32799295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2561 K22285 - gmx:100778772 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2561 9 32796199 32799295 Apr9g2561 9 32796199 32799295 ECH
Apr9g2561 9 32796199 32799295 Apr1g2317 1 32777717 32781943 PCT