Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2317 ATGGGAAAAGTGATGGAGCAGGTGGAGAAGGCAGAGAACCAAAAAGAGAAAAGAATTGTGCTAACTAAGCCAATGATATTAGAAAAGGAATGTGATTCAGACGCGGGTTATAAGGCCCCTAACCTTATGCAACGCATAATGAGTTTATTAAAAAATGTACGCCCAGGATCTGATCTCACACGCTTCCAGCTACCACCTCTATTTAACTTGCCAAAGTCACAACTACAGTGCTATGGTGAATCAGTGTATTGCACGTCTTTGGATTTGCTAAGCATATGCAACAGTGGACAGAATCCATTGGAAAGGTTCATATCTGTGGTAGCATGGTGCATATCTACCACACGGCCTGTCACTTTTGGGGTTGCTCCTTATAACCCTATTCTGGGTGAGACACACCATGTTTCAAAGGGAAACCTTAACGTGCTATTGGAACAGATTTCACATCACCCTCCAGTAAGTGCCCTCCATGCAACAGATGAGAAAGAAAACATTGAAATGATATGGTGCCAGCAACCTGTTCCAAAGTTTAATGGCACATCAATTGAAGCTCAAGTGCATGGTAAACGGCAGCTGAAGCTCCTAAATCATGGTGAAACATATGAAATGAATTGTCCTCACCTTTCATTCAGAATTCTTCCAGTCCCTGGGGCTGATTGGGCTGGCACAGTTAATATAAGGTGTCTAGAGACAAGCCTAGTTGCTGAGCTATCCTTCAGATCAAGTTCTTTTCTTGGAGTTGGGGGAAATCATAGAGTGATCAAAGGGAAGATCCTTGATTCTTCATCATTGAAAGTTCTATACCAAGTTGATGGTCACTGGGATAGGATTGTAAAATTGAAGGATACAAATAATGGGAAAGTTAGAGTGATATATGATGCAAATGAAGCGATTTCAGGGCTCCAAGCTCCTATTCTAAAGGATGTGGAGGGTGTGTGGCCAACAGAATCAGCCCATGTTTGGGGTGAATTGAGCCAAGCCATTTTGAACAAAGACTGGGAGAAAGCAAGAGAAGAAAAGCATACAGTGGAGGAAAGACTGAGGGAGCTAGAGAGAGAAAGAGAGTCAAAAGGGGAAACTTGGACTCCTAAGCATTTTGTGGCATCTTATAGCAAAGAAGTAGGGTGGGAGTGTTCACCTATTCGTAACAGGGTATCAATAGCCCCCATCGTGGCCCAATAA 1179 0.4292 MGKVMEQVEKAENQKEKRIVLTKPMILEKECDSDAGYKAPNLMQRIMSLLKNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCTSLDLLSICNSGQNPLERFISVVAWCISTTRPVTFGVAPYNPILGETHHVSKGNLNVLLEQISHHPPVSALHATDEKENIEMIWCQQPVPKFNGTSIEAQVHGKRQLKLLNHGETYEMNCPHLSFRILPVPGADWAGTVNIRCLETSLVAELSFRSSSFLGVGGNHRVIKGKILDSSSLKVLYQVDGHWDRIVKLKDTNNGKVRVIYDANEAISGLQAPILKDVEGVWPTESAHVWGELSQAILNKDWEKAREEKHTVEERLRELERERESKGETWTPKHFVASYSKEVGWECSPIRNRVSIAPIVAQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2317 392 Gene3D - 312 385 - -
Apr1g2317 392 Coils Coil 332 359 - -
Apr1g2317 392 SUPERFAMILY Oxysterol-binding protein-like 44 377 IPR037239 -
Apr1g2317 392 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 12 390 IPR000648 GO:0008289
Apr1g2317 392 Gene3D - 128 302 - -
Apr1g2317 392 ProSitePatterns Oxysterol-binding protein family signature. 144 154 IPR018494 -
Apr1g2317 392 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 12 390 - -
Apr1g2317 392 Pfam Oxysterol-binding protein 48 318 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2317 Apr-Chr1 32777717 32781943 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2317 K22285 - gmx:100813724 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2317 1 32777717 32781943 Apr1g2317 1 32777717 32781943 ECH
Apr9g2561 9 32796199 32799295 Apr1g2317 1 32777717 32781943 PCT