Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2556 ATGGGAACGTTTCAGAGCTTAAGAAAGGCCTACGGTGCTCTCAAAGACTCCACCACGGTTGGCCTGGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTGAAGGCTACCAGTCACGTAGAATATCCTCCTAAAGAACGTCATGTTCGAAAAATTTTCTACGCAACATCAGCACACCAACCACGAGCAGATGTAGCTTACTGCATATATGCACTTTCCAAGAGGCTTTCAAAAACACGGAATTGGATAGTTGCGGTAAAGACATTGATAGTCTTTCATAGGATATTAAGAGAAGGTGATCCAACAGTCAAAGAAGATCTCTTAAACTACTCACGAAGGGGACGTTTTCTTCAAATATCCAATTTCAAAGATGATTCAAGCCCTCTAGCTTGGGACTGTTCTGCATGGGTTCGAACCTATGCACTATTTTTGGAAGAAAGGCTTGAATGCTTTAGAACCCTTAAATATGACATTGAGTCTGAGCGGTTAACAAAATCATTTAAACAATCACCAGCTTCAGCTCTGGTACATAGAAAGACACGAACGTTGTCTAGTGAAGAGCTTTTGGAGCAGTTGCCTGCACTACAGCAACTTCTATATCGCCTTACTGGTTGTCAGCCTGAAGGGTCGGCTTTTAGCAATTATCTAATACAGTATGCACTGGCCCTGGTATTAAAAGAGAGCTTCAAAATATATTGCGCCCTCAATGATGGAATCATAAATCTTGTGGACGTGTTCTTTGATATGCCAAGATATGATGCAGTGAAGGCTTTACATATTTATAAAAGAGCTGGCAAACAGGCTGAAAATCTTGCTGATTTCTATGAATACTGTAAGCGATTGGACCTTGCCAGGAATTTTCAATTTCCAGCCTTGAGACAGCCACCTTCCTCTTTTATTGCCACAATGGACGAATACATTAAAGAAGCACCCCTTACAGGCGGTCTTAAGAGACTGGAGTTCCCGGAAGAAGATCAATCACCTCAAAAAGAAGAATCAGAACCAAAAGAATCCGAAGAGGCTCAAGCAAATGAGAAACCAGATGAAGAAGTCGATGAGGAAGAACCGGCAGATAAGGATGAAACACAGCCTAAGGAAGAGGAGGCTGAACTTCCTCCTTTGATATCCACTGATGATTTGGTGGGTCTAAATGAAATAAATCCAAACGCTCAAGAACTGGAAGACAGCAATGCTTTGGCGCTCGCTATTGTACCAGCTGGCGGAAATAACTCCAGTGATCTTGCCTTGAATAACATAAGCGGAACTTCTGGTTGGGAACTTGCACTGGTTACAACGCCAAGTAACCATACTAGCCAAGTAAAAGATCGCAAAATGGGTGGTGGGTTTAACAAGCTATTGCTAGATAGTTTGTATGAAGATGAAAATGCCAGGCGACAACTTCAGCTCCGAAGTTCAGGCTATGGATATGGTGAAATGGATACACATAATCCATTTAATCATTATAATCAGCATGATCCATTTGCAACGTCCAACAATATAGCACCTCCATCCAATGTGCAAATGGCTGTATTGACTCAGCAACAGCAACAGCAACAAATGATGTTCCCACAGCAACAACAACAAATGATGTTCCAACAGCAACAGCAGCAAATGACGTACCAACAACAGCAACAATACAACATGATGATGGTCCCATACCAGTATCCACAGACTCAATACCCTCAACAAATGCCAGTTATGGGTTCTTCTAATCCATTTGGTGATCCCTTACCCATGCCTAGCCATCCTTACAGTTCCATAAACCATCAAGGAAACTACCATTTAATCTAG 1800 0.4194 MGTFQSLRKAYGALKDSTTVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIYALSKRLSKTRNWIVAVKTLIVFHRILREGDPTVKEDLLNYSRRGRFLQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRTLKYDIESERLTKSFKQSPASALVHRKTRTLSSEELLEQLPALQQLLYRLTGCQPEGSAFSNYLIQYALALVLKESFKIYCALNDGIINLVDVFFDMPRYDAVKALHIYKRAGKQAENLADFYEYCKRLDLARNFQFPALRQPPSSFIATMDEYIKEAPLTGGLKRLEFPEEDQSPQKEESEPKESEEAQANEKPDEEVDEEEPADKDETQPKEEEAELPPLISTDDLVGLNEINPNAQELEDSNALALAIVPAGGNNSSDLALNNISGTSGWELALVTTPSNHTSQVKDRKMGGGFNKLLLDSLYEDENARRQLQLRSSGYGYGEMDTHNPFNHYNQHDPFATSNNIAPPSNVQMAVLTQQQQQQQMMFPQQQQQMMFQQQQQQMTYQQQQQYNMMMVPYQYPQTQYPQQMPVMGSSNPFGDPLPMPSHPYSSINHQGNYHLI* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2556 599 MobiDBLite consensus disorder prediction 347 364 - -
Apr9g2556 599 Gene3D - 5 161 IPR008942 -
Apr9g2556 599 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Apr9g2556 599 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 532 IPR045192 GO:0048268|GO:0072583
Apr9g2556 599 SUPERFAMILY GAT-like domain 182 312 - -
Apr9g2556 599 MobiDBLite consensus disorder prediction 321 346 - -
Apr9g2556 599 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Apr9g2556 599 MobiDBLite consensus disorder prediction 321 383 - -
Apr9g2556 599 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 532 - -
Apr9g2556 599 Pfam ANTH domain 31 312 IPR011417 GO:0005543
Apr9g2556 599 Gene3D ANTH domain 178 318 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Apr9g2556 599 CDD ANTH_N 32 154 - -
Apr9g2556 599 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2556 Apr-Chr9 32761619 32767230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2556 K20044 - gmx:100818165 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2556 9 32761619 32767230 Apr9g2556 9 32761619 32767230 ECH
Apr9g2556 9 32761619 32767230 Apr1g2325 1 32844090 32851514 PCT