Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2545 ATGTGGTATTCGTTCTGGAGACCCAGAGATCGTTTCTCCTTGGATCAACTCAGTTACTTAACTGATCAATTGACAAAAGTTCAAATTATTAACGAGGTTAATAAGGATTTTGTTGTTGAGGCACTGAGATCAATTGCGGAGTTGATAACATATGGTGATCAACATGACCCAAGCTTCTTTGAATTCTTCATGGAAAAGCAAGTCATGGGTGAGTTTGTACGTGTTCTAAAACTTAGCAGGACTCTAAGCGTCCCACTTCAGTTGCTGCAAACAGTGAGCATAATGGTCCAGAACCTGAAAAGTGAACACGCTATATACTATATGTTTAGTAATGAACATCTAAACTATCTGATAACTTATTCGTTTGACTTTCAAAATGAAGAGCTATTATCTTACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAATACAGTTTCACTGCTTGTGAAGACTCATGGTGATGAAGTAGTTTCTTTTCCACTGTATGTTGAGGCCATACGCTTTGCCTTTCATGAGGAGAACATGATTCGCACTGCAGTACGAGCTGTGACCCTTAATGTATATCATGTTGGAGATGACTCTGTTAATAGATACATAACCAGCACACCTCACAAAGATTACTTTTCAAACCTGGTTTCATTTTTTAGGAAGCAGAGCCTGGATTTAAATAAACTGCTTTCTGATATGCTAATAAAGCCGGTCCCAGATTCAATCTCTACAATTATTGCTGCTGTAGATGAAATTGAGGATAATCTGTACTACTTTAATGATGTTGTCTCTGCTGGAATTCCTGACGTTGGGAGGCTAATTACAGACAGTATTCTGGTGATTTTGATATTTCCATTACTTCTTCCTTCCCTGAGGATTGTGGCTGATAATGACATGCAAAGTGGCGTTGTTACTTCACTGTACTTACTTTGTTGCATCCTGAGGATAGTCAAAATCAAAGATTTGGCAAATACCATAGCTGCTGCACTTTTTTATCCCTTAGAGGCCTTTACAAATAGTTCTGGGGGTTTCCATTCAGATGGTGTTCTTCTGCAAAATGATTGTAGCAGTTCAAATTTATCTTTAAGGGAGGTTTTGCTTGCATATGTAACAAAAGGAAATGATACCCAAGTGTTGGGTTCTTTGAGTGTGCTTTCAACTCTGTTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGCAAACAACACAAGAAACTATTATTGCAAGCTTTAGTTGGAGAGGGTTCAGGTGAAGAGCAGCTTTTTTCTTCCAAAAGTAGCTTCAGTAGGGATGGCATTGGTAGTGATATTGATATCTATCATAAAAAGATAAAGGACCAGTATGAAGTATCTTTTCAGCCTTCTGATGTGGGAATAAACTCTCATGAACATAGATTTCAGGTGATTGATGCTTTAGTGAGTCTCTGTTGCCGCTCTAATTTATCTGCAGAGGCACTATGGGATGGTGGTTGGCTTTTGCGCCAGTTACTCCCTTACAGTGAGTCAGAATTTAATGGCCATCATCTTGAATTATTGAAAGTTTCATACAAGAATTATGCTTCTGCTCTTGCTGAGGAGGTTAGAGGCTTCTGGCCTGACTTCCTTATTTCTGTTCTCTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGAATCGTCATCTCCTCAAAAAGAACCAAATTACATGCTTTTTCTACCACACAAGTTTTCTTCAGAAGATGATATTCCAAAGGAATCATCTTTTGCTGCTGGAAAAAGAATGCATGAGTTGGTAAAGGTATTTGTACTGTTACACCAAATTCAAATGTTCACTCTCGGTAGAGCTTTATGTGAGCAACCTCCAATTTACCCTCCTGGTGATCTACCTGCTAATTCTCGTGCCCTGACTTCTGGGCTAGTTGTATCAAGCCCAAAGGCAGGCACTGAAGTCAGCCTTGTTAATGCTGTTCCCTGTAGAATTGCTTTCGAGAGGGGAAAAGAGCACAACTTTTGTTTTCTAGCAATCTCTTCAGGAATATCTGGGTGGCTTGTTCTTGCAGAAGCATTGCCACTGAAGAAGTCCTATGGAGTCATTCAGGTTGTTGGTTCTTTGGCTGGGTGCAATCCCAGGATTGATGATGAACATGTAACATGGTTACATTTGCGGATTCGCTCATCCTCTATACCCTTTCTAGATCCAGTCAAATTCAATGACCATGGGAAAATGAAAACAAAAACTTTGGTAGATGGAAGATGGACATTGGCGTTCAGAGATGAGGGTTCTTGCAAGTCTGCTTTTTTAATGGTTGTGGAAGAGATCAATTTTCTTAGTGGCGAGGTTCATAGAAGACTAAAACCTTTGCTCAATCTTGAAACTGCTATAGAATTATCAATCTCGTCTGTATGTGTTCCAGAGGATTCTTCTTCGCACAGAACATCTCCCAATTGA 2451 0.3937 MWYSFWRPRDRFSLDQLSYLTDQLTKVQIINEVNKDFVVEALRSIAELITYGDQHDPSFFEFFMEKQVMGEFVRVLKLSRTLSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEHLNYLITYSFDFQNEELLSYYISFLRAISGKLNKNTVSLLVKTHGDEVVSFPLYVEAIRFAFHEENMIRTAVRAVTLNVYHVGDDSVNRYITSTPHKDYFSNLVSFFRKQSLDLNKLLSDMLIKPVPDSISTIIAAVDEIEDNLYYFNDVVSAGIPDVGRLITDSILVILIFPLLLPSLRIVADNDMQSGVVTSLYLLCCILRIVKIKDLANTIAAALFYPLEAFTNSSGGFHSDGVLLQNDCSSSNLSLREVLLAYVTKGNDTQVLGSLSVLSTLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEQLFSSKSSFSRDGIGSDIDIYHKKIKDQYEVSFQPSDVGINSHEHRFQVIDALVSLCCRSNLSAEALWDGGWLLRQLLPYSESEFNGHHLELLKVSYKNYASALAEEVRGFWPDFLISVLCDEWRKCKRAMESSSPQKEPNYMLFLPHKFSSEDDIPKESSFAAGKRMHELVKVFVLLHQIQMFTLGRALCEQPPIYPPGDLPANSRALTSGLVVSSPKAGTEVSLVNAVPCRIAFERGKEHNFCFLAISSGISGWLVLAEALPLKKSYGVIQVVGSLAGCNPRIDDEHVTWLHLRIRSSSIPFLDPVKFNDHGKMKTKTLVDGRWTLAFRDEGSCKSAFLMVVEEINFLSGEVHRRLKPLLNLETAIELSISSVCVPEDSSSHRTSPN* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2545 816 PANTHER UNCHARACTERIZED 1 341 IPR039272 -
Apr9g2545 816 PANTHER UNCHARACTERIZED 340 799 IPR039272 -
Apr9g2545 816 PANTHER PROTEIN TRANSPARENT TESTA 9 1 341 - -
Apr9g2545 816 PANTHER PROTEIN TRANSPARENT TESTA 9 340 799 - -
Apr9g2545 816 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2545 Apr-Chr9 32660747 32670238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2545 K19513 - gmx:100786267 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2545 9 32660747 32670238 Apr9g2545 9 32660747 32670238 ECH
Apr9g2545 9 32660747 32670238 Apr1g2334 1 32973855 32987958 PCT