Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2334 ATGTGGTTTTCCTTCTGGAGATCCAGAGATCGTTTTTCCTTGGATCAACTCAGGTACTTAACCGATCAATTGACAAAAGTTCAAATAGTTAACGAGGTTAATAAGGATTTTGTTATTGAGGCATTGAGATCAATTGCGGAGTTGATAACGTATGGTGACCAACATGACCCGAGCTTTTTTGAATTCTTCATGGAAAAGCAAGTTGTGGGAGAGTTTGTACGTATTCTTAAACTTAGCAGAACTGTTAGCATTCCACTTCAGTTGCTACAAACAGTGAGCATTATGATCCAGAACCTAAGAAATGAACATGCTATATACTATATGTTTAGTAATGAACATATGAACTACCTAATTACATATTCATTCGATTTTCGCAATGAGGAGCTATTGTCATACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAAAGTACAATTTCTCTGCTTGTGAAGACTCACAATGATGAAGTAGTTTCATTTCCGTTGTATGTTGAGGCAATACGCTTTGCCTTTCATGAGGAGAACATGGTTCGCACAGCTGTACGCACTGTGACCCTTAATGTATATCATGTTGGGGACGAATATGTTAATAGATATATAGCCAGCGCACCTCGCACCGATTACTTCTCAAACCTGGTTTCCTTTTTCAGGAAGCAGTGTATGGATTTAAATAGATTGGTCTCTGAGACATTGAAAAATCCAGGCCAAGATTCTACCTCTGCAATTATTGCTGCTGTAGATGAAATTGAGGATAACCTGTATTACTTTAGTGATGTTATCTCTGCTGGAATTCCTGATGTTGGGAGGCTAATAACGGACAGCATTCTGATGGTTCTGGTTTTTCCAATACTTCTGCCTTCCCTGAGGATAGTGGATGTTAATGACATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTAAGGATAGTCAAGATCAAAGATTTGGCAAATACCATAGTCGCTGCTCTTTTTTGTCCCTTAGAGGCCTTTACAAAATATTCTAGGGGTATAGTCAATGGTTATGTATCTGATCGTGGTTTTACATCCAAAAGAGAAGATCCAGATGATGGTAATCTAGCCAAGTCCAATGCAGAATGCTTGACGGTGAATGTGCCACACTCTTCTAGTTTTTCAGGTTTTCACCCAGAAAGCAGTACCTTAGAAGATAGTTGTAGCAATTCAAATTTGGCTTTAAGGGAGGTTTTGCTTGCTTATGTTACTAAAGGGGATGATGTACAAGTTTTGGGTTCTCTGAGTGTGCTTGCCACTCTGCTGCAAACGAAAGAACTTGATGAATCAATGCTGGATGGGCTTGGAATTCTTCCACAACGCAAACAGCACAAGAAACAGTTATTGCAAGCATTGGTTGGTGAGGCTTCAGGGGAAGAGCGACTTTTTTCTTCTGAAAATAGCTTGATGAGGGATGGCATTGGTTGTGAGCTCGAGGTCTATCTTGAAAAGATCAAGGACCAGTATGGATTATCTTTTCTGTCTTCTGATGTTGTAACAAGCCCTCGTGTTCCTAGATTTCAGGTGCTCGATGCATTAGTGAGCCTGTTTTGCCGTTCTAATATATCTGCAGAGACACTGTGGGGTGGTGGTTGGCTTTTACGCCAGTTGCTTCCTTATAGCGAGGCAGAATTCAACAGCCATCACCTGGAATTGCTGAAAACTTCATACAAGAATTCTGCTTCTGCTCTTGTAAAGGAGGTTAGAGGTTTCTGGCCTGATCTTCTTATTACTGTTCTTTGTAATGAGTGGAGAAAGTGCAAAAGAGCAATGGAGTCATCTTCCCCTCCAAAAGAACCAAAGTGCATATTTTTTCCATCTCAGGTCTACTTTTCCGAAGAAGATATAGCCGAGGGATCATCATTTGCTGCTGGGGAAAGAGTGCACGAGTTGGTGATGGTATTTGTTCTGCTGCATCAACTTCAAATATTCACTTTAGGTAGAGCTTTGCCTGAGCAACCTCTTATTTATCCACCTGGTAATCTCCCGGCAAATTCTCGTGCCCAGACTTCTGGACTTGATGTGTCAGGCCCAAAACTTGGCACTGAAGTCAGCCTTGTTAATGCTATACCTTGTAGAATTGCTTTCGAGAGGGGCAAAGAGCGACATTTTTGTTTTCTAGCAATCTCTATAGGAACATCTGGCTGGCTTGTGCTTGCTGAAGAGCTGCCGCTGAAGAAGCCATATGGAGTTGTTCGGGTGGCTGCACCTTTGGCTGGGTGCAATCCCAGGATTGATGAGAAACATTCAAGATGGCTGCACCTGCGGATCCGACCATCCTCCTTACCTATTCTGGATCCTGCCAAATTCAATGCCATTGGGAAATTAAAGACCAGAGCTTTTGTGGATGGAAGGTGGACGTTGGCATTCAGGGATGAAGAGTCTTGCAAATCTGCTTTGTCTATGGTTCTTGAAGAGATTATTTTTCTGAGTGACGAGGTTCACAGAAGACTAAAACCTTTGCTCAACCTCGAAACTGCAATGGATTTATCAGGTCCGTCTGTATGTGATCCAGAGGATTCCTCTTTACATACAACGCCTCTCAATTCGATGTAA 2586 0.4157 MWFSFWRSRDRFSLDQLRYLTDQLTKVQIVNEVNKDFVIEALRSIAELITYGDQHDPSFFEFFMEKQVVGEFVRILKLSRTVSIPLQLLQTVSIMIQNLRNEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKSTISLLVKTHNDEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDEYVNRYIASAPRTDYFSNLVSFFRKQCMDLNRLVSETLKNPGQDSTSAIIAAVDEIEDNLYYFSDVISAGIPDVGRLITDSILMVLVFPILLPSLRIVDVNDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALFCPLEAFTKYSRGIVNGYVSDRGFTSKREDPDDGNLAKSNAECLTVNVPHSSSFSGFHPESSTLEDSCSNSNLALREVLLAYVTKGDDVQVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKQLLQALVGEASGEERLFSSENSLMRDGIGCELEVYLEKIKDQYGLSFLSSDVVTSPRVPRFQVLDALVSLFCRSNISAETLWGGGWLLRQLLPYSEAEFNSHHLELLKTSYKNSASALVKEVRGFWPDLLITVLCNEWRKCKRAMESSSPPKEPKCIFFPSQVYFSEEDIAEGSSFAAGERVHELVMVFVLLHQLQIFTLGRALPEQPLIYPPGNLPANSRAQTSGLDVSGPKLGTEVSLVNAIPCRIAFERGKERHFCFLAISIGTSGWLVLAEELPLKKPYGVVRVAAPLAGCNPRIDEKHSRWLHLRIRPSSLPILDPAKFNAIGKLKTRAFVDGRWTLAFRDEESCKSALSMVLEEIIFLSDEVHRRLKPLLNLETAMDLSGPSVCDPEDSSLHTTPLNSM* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2334 861 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Apr1g2334 861 PANTHER PROTEIN TRANSPARENT TESTA 9 1 842 - -
Apr1g2334 861 PANTHER UNCHARACTERIZED 1 842 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2334 Apr-Chr1 32973855 32987958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2334 K19513 - gmx:100789779 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2334 1 32973855 32987958 Apr1g2334 1 32973855 32987958 ECH
Apr9g2545 9 32660747 32670238 Apr1g2334 1 32973855 32987958 PCT