Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2540 ATGATGTATGAACAACAACAACGGCTCCAGCAGCCGATGATGAAGATGGACGTCAGGAAGAAGACGGAGAGAAACAAAAGCATAGAGGAAGAGAGGCTTGAAATAGTGGACTTGAGTGGCATGTCCTTAGACTCTCTTCCCAACCCTTCTCTTAATTTAGCTTCCATTTGCAAGTTGGACCTCTCTAACAACAATCTTCAGAGTATTCCGGAGTCCTTAACGGCGAGACTGTTGAACATGGTAGTGTTGGATGTGCGGTCCAACCAGCTTAGGTCCCTTCCCAATTCCATTGGATGCCTCTCTAAGCTCAAAGTTTTGAATGTCGCTGGCAACCTCATCGAATACCTTCCCAAGACAATCGAGAATTGCAGGGCCTTAGAAGAACTGAATGCCAACTTCAACAGGCTGAGACAGCTTCCTGAAACCCTAGGCTTCGAACTCACAAACCTGAAGAAACTATCAGTGAACTCCAACATGCTACTCTTCCTTCCTCGTTCAACCTCGTACCTCACAGCCCTCAAGGTCCTCGACGCGCGCCTCAACTGCCTCAGGTCTCTCCCAGAAGACCTCGAAAACCTCATCAACCTCGAAATCCTAAACGTGAGCCAAAACTTCCAATACCTCGAGTCTCTACCCTACTCCATTGGCCTCCTCTTATCATTGGTTGAACTCGACGTTAGCTACAACAAGATCAAGGCCTTACCTGACTCCATTGGGTGCCTCAAGAAGCTTCAAAAGCTAAGTGTGGAAGGGAACCCTTTAACTTCACCACCACATGAAGTGGTAGAGCAGGGATTGCATGTGGTGAAGCAGTACCTGTGCCAGAAGATGAACACGGGCCATCAAACTCCAACTAAGAAGAAATCATGGGTGGGAAAGTTGGTGAAGTATGGGACCTTCAATGGACACGGGAAGAATACTGGGGCCCGCGAAGAACGTGAAGCTTTTATTATGCCTGAGTATAGATCAATTGATGGCCTTGCTTCGCCAAGCTACATGGGAATGTTTTCACCTCGTCGCCTCTTCTCACCTCGTACTTTCTTCACCAATTGA 1053 0.4767 MMYEQQQRLQQPMMKMDVRKKTERNKSIEEERLEIVDLSGMSLDSLPNPSLNLASICKLDLSNNNLQSIPESLTARLLNMVVLDVRSNQLRSLPNSIGCLSKLKVLNVAGNLIEYLPKTIENCRALEELNANFNRLRQLPETLGFELTNLKKLSVNSNMLLFLPRSTSYLTALKVLDARLNCLRSLPEDLENLINLEILNVSQNFQYLESLPYSIGLLLSLVELDVSYNKIKALPDSIGCLKKLQKLSVEGNPLTSPPHEVVEQGLHVVKQYLCQKMNTGHQTPTKKKSWVGKLVKYGTFNGHGKNTGAREEREAFIMPEYRSIDGLASPSYMGMFSPRRLFSPRTFFTN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2540 350 MobiDBLite consensus disorder prediction 1 24 - -
Apr9g2540 350 SMART LRR_typ_2 77 99 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 241 264 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 170 193 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 124 146 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 53 76 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 100 123 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 218 240 IPR003591 -
Apr9g2540 350 SMART LRR_typ_2 147 169 IPR003591 -
Apr9g2540 350 ProSiteProfiles Leucine-rich repeat profile. 55 76 IPR001611 GO:0005515
Apr9g2540 350 Gene3D Ribonuclease Inhibitor 146 275 IPR032675 -
Apr9g2540 350 Gene3D Ribonuclease Inhibitor 2 145 IPR032675 -
Apr9g2540 350 Pfam Leucine rich repeat 58 113 IPR001611 GO:0005515
Apr9g2540 350 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 343 - -
Apr9g2540 350 PANTHER LEUCINE-RICH REPEAT-CONTAINING 5 343 - -
Apr9g2540 350 SMART LRR_bac_2 193 214 - -
Apr9g2540 350 SMART LRR_bac_2 100 119 - -
Apr9g2540 350 SMART LRR_bac_2 241 260 - -
Apr9g2540 350 SMART LRR_bac_2 218 237 - -
Apr9g2540 350 SMART LRR_bac_2 123 142 - -
Apr9g2540 350 SMART LRR_bac_2 170 189 - -
Apr9g2540 350 SMART LRR_bac_2 53 72 - -
Apr9g2540 350 SMART LRR_bac_2 77 96 - -
Apr9g2540 350 SUPERFAMILY L domain-like 33 262 - -
Apr9g2540 350 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Apr9g2540 350 SMART LRR_sd22_2 147 172 - -
Apr9g2540 350 SMART LRR_sd22_2 77 98 - -
Apr9g2540 350 SMART LRR_sd22_2 218 249 - -
Apr9g2540 350 SMART LRR_sd22_2 100 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2540 Apr-Chr9 32576740 32581182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2540 51 264 Receptor kinase-like Gene Family AT5G51350 32.735 1.57e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2540 - - gmx:100783239 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2540 9 32576740 32581182 Apr9g2540 9 32576740 32581182 ECH
Apr9g2540 9 32576740 32581182 Apr1g2339 1 33067504 33072544 PCT