Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2538 ATGATAACTGGTAAGGACATTTATGATGTTTTTGCGGCTATTGTGCCCCTATATGTGGCTATGATACTAGCATATGGCTCAGTTCGGTGGTGGAAAATTTTCACACCAGACCAGTGTTCTGGCATAAACCGCTTTGTTGCTGTGTTTGCAGTTCCTTTACTTTCTTTTCACTTCATCTCCTCCAACAACCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTCTCTTCAAAAAATTGTCATTTTGGGTGCTCTTTTTCTATGGAACACCTTCACAAAACATGGAAGCCTTGACTGGACCATTACCCTCTTCTCACTTTCCACTCTTCCAAACACACTTGTCATGGGAATCCCTCTCTTGAAGGCCATGTATGGAGACTTTTCAGGGAGCCTCATGGTCCAAATTGTGGTCTTGCAAAGTGTCATTTGGTACACTCTCATGCTGTTCATGTTTGAATATAGAGGTGCTAAGCTCCTCATCACAGAGCAGTTCCCTGAGACTGCAGGCTCCATCACTTCCTTCAGGGTTGATTCAGATGTTGTCTCACTCAATGGTAGAGAGCCACTACAAGCTGATGCTGAGATAGGAGAAGATGGAAAACTTCATGTTGTGGTTAAGAGATCAGCTGCTTCTTCTATGATATCTTCTTTCAACAAGTCCCATTTAACTTCTATGACACCTAGAGCTTCAAATCTTACTGGTGTTGAGATCTATTCAGTCCAGTCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTCAATCAAACAGATTTTTATGCCATGTTTGCAAGCAAAGCACCGAGTCCAAAACATGGCTACACAAATAGTTTCCAAAGTAATGGAATTGGTGATGTTTACTCTTTGCAATCTTCAAAAGGAGCAACACCAAGAACTTCTAATTTTGAAGAGGAGATGTTGAAGATGAATAAGAAGAGGGGAGGGAGGAGCATGAGTGGTGAGTTGTTTAATGGAGGCTTGGTTTCTTCTTACCCTCCTCCGAACCCTATGTTTTCAGGGTCTACTAGTGCTGGTCCCAAAAAGAAAGATAGCAGTGGTGGTGGTGCACCTAACAAAGAGTTACACATGTTTGTTTGGAGTTCAAGTGCATCACCAGTTTCTGAGGGGAATCTGAGGCATGCAGTTAATAGAGCTGCTTCTACTGACTTTGGTACCATTGATCCTTCCAAGGCAACACCACACGAAACTGTTGCCTCAAAAGGTAATCCCAAAGTCACAAATCATAAGTACATCATTGGATCTCCATACACTTGCCAGAAGAAGGTGGACATGGAAGAAGGAAATGCAAACAAAAATCAACAGATGCCACCTACAAGTGTCATGACAAGACTCATTCTCATCATGGTTTGGAGGAAACTCATAAGAAATCCCAATACCTACTCCAGTCTTTTGGGACTCATATGGTCTCTCATATCATATAGGTGGCACATTGAAATGCCTTCTATTGTAAAAGGTTCTATCTCAATACTGTCTGATGCAGGTCTTGGAATGGCCATGTTCAGTCTAGGTCTATTCATGGCATTACAACCGAAGATCATCGCGTGTGGAAAATCTGTGGCAGCATTTTCTATGGCAGTTAGGTTCTTGACAGGTCCAGCTGTGATTGCCGCAACTTCAATAGGCACGGGACTCCGTGGAGTTCTTCTGCATGTTGCAATTGTCCAGGCTGCCCTTCCCCAAGGTATCGTTCCCTTTGTGTTCGCCAAAGAATACAATCTCCATGCAGATATACTTAGTACTGCGGTTATATTTGGAATGCTGATTGCATTGCCCATAACAATACTCTACTACGTGCTTCTTGGACTCTAG 1830 0.4279 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNNPYAMNYHFIAADSLQKIVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQADAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNGIGDVYSLQSSKGATPRTSNFEEEMLKMNKKRGGRSMSGELFNGGLVSSYPPPNPMFSGSTSAGPKKKDSSGGGAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTIDPSKATPHETVASKGNPKVTNHKYIIGSPYTCQKKVDMEEGNANKNQQMPPTSVMTRLILIMVWRKLIRNPNTYSSLLGLIWSLISYRWHIEMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGTGLRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2538 609 Pfam Membrane transport protein 10 604 IPR004776 GO:0016021|GO:0055085
Apr9g2538 609 MobiDBLite consensus disorder prediction 334 348 - -
Apr9g2538 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 609 IPR033526 GO:0010315|GO:0010329
Apr9g2538 609 MobiDBLite consensus disorder prediction 389 409 - -
Apr9g2538 609 TIGRFAM 2a69: auxin efflux carrier 1 609 IPR014024 -
Apr9g2538 609 MobiDBLite consensus disorder prediction 332 359 - -
Apr9g2538 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2538 Apr-Chr9 32555447 32558590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2538 102 609 Organic Solute Cotransporters AT5G57090 71.978 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2538 K13947 - gmx:100305383 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2538 9 32555447 32558590 Apr9g2538 9 32555447 32558590 ECH
Apr9g2538 9 32555447 32558590 Apr1g2342 1 33084862 33089028 PCT