Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2523 ATGGGTTCACGGGTGCTAATGGACAATTTACTGCTGAGGGGAAAATTTCACATTCTTCTGTTATTTTTGTATGTTTGTGCAGTCACAGCCTCTGTGACTTATGATCACAAAGCCATTATTGTTAATGGGCAGAGAAGAATTTTGATCTCTGGTTCCATCCACTACCCAAGAAGCACACCTGAGATGTGGCCAGACCTAATTCAAAAGGCCAAAGATGGAGGCTTAGATGTTATACAAACCTATGTGTTTTGGAATGGACATGAGCCTTCTCCAGGAAAGTATTATTTCGAGGATAGGTACGACTTAGTTAAGTTCATCAAGCTCGTGCAGCAAGCTGGGCTTTATGTTCATCTCCGCATTGGTCCCTACATATGTGCTGAATGGAACTTTGGGGGATTCCCTGTTTGGCTCAAGTATGTTCCGGGTATTGCTTTCAGAACAGATAATGAGCCTTTCAAGGCGGCAATGCAAAAATTTACTGGGAAGATTGTCAGCATGATGAAGGCAGAGAAATTGTTTCAGACGCAGGGAGGTCCAATAATTCTGTCTCAGATAGAGAACGAATTTGGACCAGTGGAATGGGAAATTGGTGCTCCAGGAAAAGCTTATACACAATGGGCAGCTCAAATGGCTGTAGGTTTAAATACTGGTGTCCCCTGGATTATGTGCAAGCAAGAAGATGCTCCTGATCCTGTTATTGACACTTGCAATGGATTCTACTGTGAAAACTTCACTCCTAACAAGAAATACAAACCCAAAATGTGGACAGAGAACTGGACTGGCTGGTACACTGAGTTTGGTGGTGCTGTCCCGCGTAGACCAGCAGAAGACTTGGCATTCTCTGTTGTGAGATTCATACAGAATGCTGGTTCATTTGTTAATTACTATATGTATCATGGAGGAACTAACTTTGACCGGACATCTGGTGGCCCCTTCATTGCCACCAGTTATGACTATGATGCTCCCATTGATGAATTCGGGCTTCTAAATGAACCAAAATATGGGCATTTGAGAGATTTGCACAAAGCAATAAAGCTATGTGAGCCGGCTTTGGTGTCTGTAGATCCCACAGTGACATGGCCTGGAAATAACCTGGAGGTACACGTGTTCAAGACTTCTGGTGCTTGCGCTGCGTTCCTTGCAAATTATGACACCAAATCTTCTGCAACAATTACATTTGGAAATGGACAGTATGACCTACCACCTTGGTCTATCAGCATTCTCCCTGACTGCAAGACTGCAGTTTTCAACACTGCAAGGCTTGGTGCTCAAAGCTCCCAGATGAAGATGACTGCCGTAAACAGTGCATTTGCTTGGCAGTCATACAATGAAGAACCTGCATCATCTAGTGAAGATGATCCCGTCACAGCATTCGCACTTTGGGAGCAGATTAATGTCACCCGAGATTCTACCGATTATTTGTGGTATATGACAGATGTCAACATTGATCCAAATGAAGGTTTTATAAAGAATGGAAAATATCCTATTCTCACCGTAATGTCAGCAGGCCATGCTTTGCATGTCTTCATTAATGGCCAACTTTCAGGAACTGTGTACGGGGGATTGGAGTTTCCTAAATTAACATTTAGTGACACTGTTAAGCTGAGAGTTGGCAATAACAAGATTTCTTTACTTAGTATTGCTGTGGGTCTCCCGAATGTTGGTGTGCACTTTGAGACATGGAATGCTGGGGTGTTGGGGCCAGTCACACTGAAGGGTCTTAATGAGGGGACCAGAGACTTGTCTCGTCAGAAATGGTCTTACAAGGTTGGTCTCGAGGGTGAAGCCTTAAATCTTCACACTGTAAGTGGGAGTACATCCGTTGAATGGGTCGAAGGATCATTATTGGCTAAGAAACAACCTTTGACATGGTACAAGACAACTTTTAGCTCACCAGCAGGCAATGATCCATTGGCTCTAGACATGATTAGCATGGGAAAGGGTCAAGTATGGATAAATGATCGAAGCATTGGACGCCATTGGCCAGGATATATAGCTCATGGTAGTTGTGGGGATTGTTATTATGCTGGAACTTACACTGACAAAAAATGCGGGACAAATTGTGGAGAACCCTCCCAGAGATGGTACCATGTTCCTCGGTCTTGGCTGAACCCAAGCGAGAACTATCTGGTCGTGTTTGAAGAATGGGGAGGTGACCCTACTGGAATTTCTTTGGTAACAAGAACAACAGCAAGTGTGTGTGCTGATATATATGAAGGGCAACCAACTCTAAAGAACCGGCACATGCTAGACTCTGGTAAAGTTAATAGACCAAAAGCTCACTTGTGGTGTCCACCTGGGCAAAAGATCTCTCAGATTAAATTTGCTAGTTATGGATTGCCAGAGGGAACTTGTGGAAACTTTAGAGAAGGAAGCTGTCATGCTCACAAATCATATGATGCTCCTGAAAAGAACTGCATTGACAAGCAATCTTGCTTGGTGACTGTGGCTCCTGAAGTTTTTGGGGGAGACCCATGTCCAGGAATTGCAAAGAAGCTCTCAGTTGAGGCACTATGCAGCTAG 2523 0.4392 MGSRVLMDNLLLRGKFHILLLFLYVCAVTASVTYDHKAIIVNGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTGKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEWEIGAPGKAYTQWAAQMAVGLNTGVPWIMCKQEDAPDPVIDTCNGFYCENFTPNKKYKPKMWTENWTGWYTEFGGAVPRRPAEDLAFSVVRFIQNAGSFVNYYMYHGGTNFDRTSGGPFIATSYDYDAPIDEFGLLNEPKYGHLRDLHKAIKLCEPALVSVDPTVTWPGNNLEVHVFKTSGACAAFLANYDTKSSATITFGNGQYDLPPWSISILPDCKTAVFNTARLGAQSSQMKMTAVNSAFAWQSYNEEPASSSEDDPVTAFALWEQINVTRDSTDYLWYMTDVNIDPNEGFIKNGKYPILTVMSAGHALHVFINGQLSGTVYGGLEFPKLTFSDTVKLRVGNNKISLLSIAVGLPNVGVHFETWNAGVLGPVTLKGLNEGTRDLSRQKWSYKVGLEGEALNLHTVSGSTSVEWVEGSLLAKKQPLTWYKTTFSSPAGNDPLALDMISMGKGQVWINDRSIGRHWPGYIAHGSCGDCYYAGTYTDKKCGTNCGEPSQRWYHVPRSWLNPSENYLVVFEEWGGDPTGISLVTRTTASVCADIYEGQPTLKNRHMLDSGKVNRPKAHLWCPPGQKISQIKFASYGLPEGTCGNFREGSCHAHKSYDAPEKNCIDKQSCLVTVAPEVFGGDPCPGIAKKLSVEALCS* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2523 840 ProSiteProfiles SUEL-type lectin domain profile. 754 840 IPR000922 GO:0030246
Apr9g2523 840 PANTHER BETA-GALACTOSIDASE 17 729 - -
Apr9g2523 840 Gene3D - 750 840 IPR043159 -
Apr9g2523 840 PANTHER BETA-GALACTOSIDASE RELATED 17 729 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 Pfam Galactose binding lectin domain 762 839 IPR000922 GO:0030246
Apr9g2523 840 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Apr9g2523 840 SUPERFAMILY Galactose-binding domain-like 405 575 IPR008979 -
Apr9g2523 840 Pfam Beta-sandwich domain in beta galactosidase 351 420 IPR041392 -
Apr9g2523 840 SUPERFAMILY Galactose-binding domain-like 585 744 IPR008979 -
Apr9g2523 840 Pfam Glycosyl hydrolases family 35 39 343 IPR031330 -
Apr9g2523 840 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Apr9g2523 840 Gene3D Glycosidases 25 347 - -
Apr9g2523 840 Gene3D - 593 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2523 Apr-Chr9 32426118 32434776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2523 1 840 Glycoside Hydrolase AT3G13750 70.401 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2523 - - gmx:106795462 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2523 9 32426118 32434776 Apr9g2523 9 32426118 32434776 ECH
Apr9g2523 9 32426118 32434776 Apr1g2354 1 33199886 33205644 PCT