Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2516 ATGGCAGACTCAGCCACCCTCATAGCTACCTGGTTCACACCTTCTTCCGTCTTCATCGTCGTTAACCTCGTCATCGCCACCATAGCACTCACTTCGCGCTTCACTAAGCAACTCCACCAACCCCAACCCCAACGACTCGTTCGAACCCCCTCACTATTAGAACGTGTCAGCTCCTTCAACTTCGCTCTCTACAAACACCAACCAACCCATGCAGAAATAGAACACATCCAACCCCAAGGACCCGAACCCGAACCTGAAAACCCGCAACTAATTCGGACTCCCTCGCTTCTGCAGCGGCTTCAGTCCATGAACTTCTCCCGCTTCTACAGATCGGAGGAAGAGGATCCGGGTCGCGATTCGGGTAATTCGGAGTTAAGGAAATCGGCGAGCGAGAACGCGGGTTCAGTGAAGGGAGAGTGGGAGGATGAAGGGTCGACGGTGGAGCAGCGGAGGCCGGCGACGGCGAGGGGTGGAATGGTGTCGTGGAGAGGGGACGAAGAGGTTGACGCGAAAGCTGATGATTTCATTAACAGGTTCAAGAAGCAGTTGCGGTTGCAGAGGGTTGATTCCGTTCTTCGTTACAGAGAGATGCTGAGAAGAGGTAAAACCCTCCACACATCCGCCAGGAATGCGGCAGTGTTGCCGGCGGAGATAAGCTGGCGAAAAATCGCCGACAACAAAAATACTACAGTTTTCTTGCCGTCGATGAACTTAACCGCCTTGAAAAAGAGCATCTCAATGGTTCGAAGCAGCGTTAATTTAACCTTCGTTGTTCTCCTCGTCGACGCGCGATTCGCCATCATCGTCACCGTTCATTGCGGAACCTGTGACTCCGCCTATTTCTATTTCTTCTCCGAGGGATGGACCACCGGCAACATGGGGTTGAAGTTCCCAAAAGGGTGGTGTTGA 909 0.5303 MADSATLIATWFTPSSVFIVVNLVIATIALTSRFTKQLHQPQPQRLVRTPSLLERVSSFNFALYKHQPTHAEIEHIQPQGPEPEPENPQLIRTPSLLQRLQSMNFSRFYRSEEEDPGRDSGNSELRKSASENAGSVKGEWEDEGSTVEQRRPATARGGMVSWRGDEEVDAKADDFINRFKKQLRLQRVDSVLRYREMLRRGKTLHTSARNAAVLPAEISWRKIADNKNTTVFLPSMNLTALKKSISMVRSSVNLTFVVLLVDARFAIIVTVHCGTCDSAYFYFFSEGWTTGNMGLKFPKGWC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2516 302 PANTHER DUF4408 DOMAIN PROTEIN 120 201 - -
Apr9g2516 302 PANTHER DUF4408 DOMAIN PROTEIN 3 67 - -
Apr9g2516 302 PANTHER COTTON FIBER (DUF761) 120 201 - -
Apr9g2516 302 PANTHER COTTON FIBER (DUF761) 3 67 - -
Apr9g2516 302 Pfam Domain of unknown function (DUF4408) 8 34 IPR025520 -
Apr9g2516 302 MobiDBLite consensus disorder prediction 108 125 - -
Apr9g2516 302 Pfam Cotton fibre expressed protein 165 200 IPR008480 -
Apr9g2516 302 MobiDBLite consensus disorder prediction 108 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2516 Apr-Chr9 32386077 32387710 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2516 - - aprc:113874739 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2516 9 32386077 32387710 Apr9g2516 9 32386077 32387710 ECH
Apr9g2516 9 32386077 32387710 Apr1g2358 1 33256356 33257311 PCT