Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2358 ATGAGTGAAACACAGGGAGAAGCATTTTCAGCTTACGAAGTGATGTCAAGTTGGTTAACACCCTCGTGCCTATTCATCATAATCAACCTCGTCATAGCAACCATAGCCATCACTTCTCGTTTCGCCAACCCCACAAAAAAACAACTCCAACGTTCTCCCTCCTTACTAGATCGACTCATGTCCTTCCGTTGCTACAAACACGAAACGTCAAACCCAGTTCAGACCCATGACGCACCCCGGTTCGACCGGGTTTCGTCGTCGTTGCTGGACCGGGTGAGGTCGTTCAATCTCGCCCTACACGAAGAGGATCCGAAACCCGACCCGAATGAGCCGACCAAACAGCAACTGACCCGCGCTCCCTCGCTATTGGAGCGGCTTATGTCGGTGAAGCTATACAGATCGGAGTCTGTGAAGGAACCTGAACCCGAACCCAAAGCTAAGGTTACGGAGGAAGAAGAGGAAGAAGGGGTGGATGCTAAGGCTGATGATTTTATCAATAGGTTTAGGCAGCAACTAAGGTTGCAGAGACTCGACTCTATTCTACGTTACAGGGATATGCTCAAACGAAACTGA 573 0.4974 MSETQGEAFSAYEVMSSWLTPSCLFIIINLVIATIAITSRFANPTKKQLQRSPSLLDRLMSFRCYKHETSNPVQTHDAPRFDRVSSSLLDRVRSFNLALHEEDPKPDPNEPTKQQLTRAPSLLERLMSVKLYRSESVKEPEPEPKAKVTEEEEEEGVDAKADDFINRFRQQLRLQRLDSILRYRDMLKRN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2358 190 MobiDBLite consensus disorder prediction 133 161 - -
Apr1g2358 190 Pfam Cotton fibre expressed protein 155 189 IPR008480 -
Apr1g2358 190 PANTHER DUF4408 DOMAIN PROTEIN 10 67 - -
Apr1g2358 190 PANTHER DUF4408 DOMAIN PROTEIN 135 190 - -
Apr1g2358 190 MobiDBLite consensus disorder prediction 99 119 - -
Apr1g2358 190 Pfam Domain of unknown function (DUF4408) 10 41 IPR025520 -
Apr1g2358 190 PANTHER COTTON FIBER (DUF761) 135 190 - -
Apr1g2358 190 PANTHER COTTON FIBER (DUF761) 10 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2358 Apr-Chr1 33256356 33257311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2358 - - aprc:113852924 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2358 1 33256356 33257311 Apr1g2358 1 33256356 33257311 ECH
Apr9g2516 9 32386077 32387710 Apr1g2358 1 33256356 33257311 PCT