Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2515 ATGGCAAGTTATTTTTTAGTTTCAAAAGCTTTGATTCTGCTTTGGCTAACTTGCATAGTGGTCACACAGGCACGATCACAACCGTGGTCACCACTCCAAGCACCCAAAGAACTAGCCTTGAAGCTTATTCGTGACCCTATGACCCTTTCACTAGCTTCAACCGATTTTGGTCGCATAATTCACGATAACCCTTTAGCAATGTTTGCCCCATCATCCATTAGTGACATATCCAATTTGATAAAATTCTCAAATTCTCTTCCCATACCTTTCACCATAGCTCCTAGAGGCCAAGCCCACTCGGTTCATGGACAAGCCATGACAAATGATGGGATTGTGGTGAACATGACAGAGTTGAGTGGTTTTAGAAATGGGGCTGGGATTATTGTGTATGATGGGAAAACTCCATATGCAGATGTGGGTGGTGAACAAATTTGGATTGATGTGCTGCATGCAACCCTTGAGCGTGGACTTACACCCCTCGCTTGGACTGATTATTTGTTCTTATCGGTTGGTGGAACTCTCTCCAATGCTGGGATCAGTGGCCAAGCCTTCCGATTTGGTCCTCAAATTTCCAATGTTCATGAATTGGATGTTATTACGGGGAAGGGAGATCTAGTGACTTGTTCAGCGGAGAAGAACTCAAACTTATTTTACGCCGTTCTTGGAGGTTTAGGTCAATTTGGAATCATAACCAGAGCAAGAATAGCTCTAGGGACCGCACCAACCAGGGTGAAGTGGCTTCATTTGCTTTACGACGACTTCTCAGCGTTTTCTAGAGATCAAGAACACTTAATCTCATTCAATGGAAGAAACGAAACTAATGCTGCTGATTATGTAGAAGGTTTGCTTCTGCTAAATCAGCCACCACTGGACCTTTCCTTTTATCCAGCACCTGATCAGCCTCGCATTACTTCCCTTGTAACCAAATACGGCATAATCTATATTATAGAGCTTGTCAAATATTATCACAATAGTTCTCAAACGCATGTGGATGAGGATGTAAAACATTTGTTGGAGGGGTTAAAGTTTGTTCCTACATTTATGTTCGAGAAAGATGTGTCGTACGAAGAGTTTCTGAACAGAGTTCATGCTAGCGAGGTTTCGCTTAGGTCACAAGGGCTTTGGGATATTCCTCATCCTTGGTTAAACCTTTTCATTCCAGGATCTCGAATCTCCGATTTCAATGAAGGTGTATTCAAGGGCATTATTTTTGAGCAAAATATCACTGCAGGAGTCGTGCTAATCTACCCCTTGAACCGAACCAGGTGGGATGATAAGATGTCAGCAGTTACACCTGATGAAGATATTTTCTATGCGGTGTCTCTTCTGCATGCAACTGGGTCTGATAAAGTGGAGGAATTTCGAGTTCAAAACCAACAAGTATTACAGTTCTGTGCAGATGCTGGAATTGGGTTCAAGCAATATTTGCCCCAAAACAAAACACGGGAACAATGGGTGGAACACTTTGGTCCCAAATGGAAAGTTTTCGAAGAAAGAAAACTTCAATTTGATCCAAACAGAATATTGTCACCTGGACAAGGGATTTTCAATTAA 1554 0.4221 MASYFLVSKALILLWLTCIVVTQARSQPWSPLQAPKELALKLIRDPMTLSLASTDFGRIIHDNPLAMFAPSSISDISNLIKFSNSLPIPFTIAPRGQAHSVHGQAMTNDGIVVNMTELSGFRNGAGIIVYDGKTPYADVGGEQIWIDVLHATLERGLTPLAWTDYLFLSVGGTLSNAGISGQAFRFGPQISNVHELDVITGKGDLVTCSAEKNSNLFYAVLGGLGQFGIITRARIALGTAPTRVKWLHLLYDDFSAFSRDQEHLISFNGRNETNAADYVEGLLLLNQPPLDLSFYPAPDQPRITSLVTKYGIIYIIELVKYYHNSSQTHVDEDVKHLLEGLKFVPTFMFEKDVSYEEFLNRVHASEVSLRSQGLWDIPHPWLNLFIPGSRISDFNEGVFKGIIFEQNITAGVVLIYPLNRTRWDDKMSAVTPDEDIFYAVSLLHATGSDKVEEFRVQNQQVLQFCADAGIGFKQYLPQNKTREQWVEHFGPKWKVFEERKLQFDPNRILSPGQGIFN* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2515 517 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 241 516 IPR015345 GO:0009690|GO:0019139|GO:0050660
Apr9g2515 517 Gene3D - 115 242 IPR016169 -
Apr9g2515 517 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 237 IPR036318 GO:0050660
Apr9g2515 517 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 240 IPR016166 GO:0071949
Apr9g2515 517 Gene3D - 45 516 IPR016167 -
Apr9g2515 517 Gene3D - 243 475 IPR016170 -
Apr9g2515 517 SUPERFAMILY FAD-linked oxidases, C-terminal domain 241 517 IPR016164 GO:0003824|GO:0050660
Apr9g2515 517 Pfam FAD binding domain 64 209 IPR006094 GO:0050660
Apr9g2515 517 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 517 - -
Apr9g2515 517 PANTHER GULONOLACTONE OXIDASE 8 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2515 Apr-Chr9 32377709 32382381 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2515 K00279 - gmx:100816815 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2515 9 32377709 32382381 Apr1g2360 1 33264875 33272663 PCT