Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2360 ATGGTGAGGAATTTTATGTTTTCAAAAGCGATGACTCTACTATGGTTCTCCATCTTAATGCTCACAGCAGCACAACCACGACCATGGTCAGCATTCCAAGCACCAAAAGAGGTAGCCTCAAAGCTTAGTCGTAATCCTCAAACCCTTTCACTAGCCTCAACCGATTATGGCCACATAGTTCATGAAACCCCTTGGGCAGTTTTTGAGCCATCACACGTTAATGATATCATGTCCTTGATAAAATTCTCAAACTCTCTTCCCACACCTTTTACTATAGCCGCAAGAGGGCAAGCCCACTCGATTCTTGGACAAGGCATGACACAAGATGGGGTGGTGCTGAATATGACTAAGCTTAATGGTATTAGAAATGGGTCTGGAATTGTTATAGTGTGTGATTTTGATGGGAAGAAGAGTCCATTGGGTTGTTATGGTGATGTGGGTGGTGAACAAAAGTGGATTGATATGTTGCATGCAAGCCTTGAACGTGGACTCACACCTCTGTCTTGGACTGATTACTTGTATTTGACGGTTGGTGGCACACTTTCTAATGCTGGGATTAGTGGCCAAGCCTTTCGATTTGGACCACAGATTTCCAATGTTCTTGAGTTGGATGTTGTTACAGGGAAAGGAGACCTTGTGACTTGTTCTGCGGAGACGAACTCAGAGGCATTTTATGCCGTTCTTGGCGGATTAGGTCAATTTGGGGTGATAGTAAGAGCAAGAATAGCTCTACGACCTGCACCCACCAAGGTGAAGTGGATCCGACTACTTTACAATGACTTCACTGCATTTTCCAGAGACGAAGAACATTTAATCTCGTTCAATGAAAATAATGACACTAATGCAGCAGATTATGTAGAAGGCATGCTTCTATTGAATCAGCCGCCACTGGATCTTTCCTTTTATCCAGTTTCTGATAAGCTAAGGATAAATTCCCTCGTAACTCAATACGGCATTATCTACATCATAGAGCTAGTCAAATACTATGACAACAACCCTCAAGCACACGTCATTGAGGAAGTTGAAACTTTGGTCAAAGGGTTAGAATATGTTCCTACATTCATGTTCGAAAAAGATGTGTCGTACGAGGAGTTTCTGAACAGAGTTCATGGTGAGGAGCTAGTTCTGAGGTCAAAAGGACTCTGGGAATTTCCTCATCCTTGGCTGAATGTTTTCGTTCCAAGATCTCGAATCTCGGATTTTAATGAAGGCGTGTTCAAGGGCATTATTCTTAAGCAAAATATTACTGCTGGAACTGCTCTAGTGTACCCCATGAATCGAAACAAGTGGGATGATAGGATGTCAGCAGTTACACCAGACGAAGATGTTTTCTACGTTGTAAGTCTTTTGCATGCTGCAAGTGGGTTTGAACAGGTGAAAACATTTCAGGCTCAAAACCAACAGATATTACAGTTTTGCAAGGATGCTGGTATCAAGATCACTGAATATCTTACCGGTAACAAAACACATCAAGAATGGGTGGAGCACTTTGGCCCAAAATGGAAACTTATTGAAGATAGAAAAGCTCAATTTGATCCCAAAAAAATATTGTCACCTGGACAAGGGATTTTCAAATGA 1578 0.4195 MVRNFMFSKAMTLLWFSILMLTAAQPRPWSAFQAPKEVASKLSRNPQTLSLASTDYGHIVHETPWAVFEPSHVNDIMSLIKFSNSLPTPFTIAARGQAHSILGQGMTQDGVVLNMTKLNGIRNGSGIVIVCDFDGKKSPLGCYGDVGGEQKWIDMLHASLERGLTPLSWTDYLYLTVGGTLSNAGISGQAFRFGPQISNVLELDVVTGKGDLVTCSAETNSEAFYAVLGGLGQFGVIVRARIALRPAPTKVKWIRLLYNDFTAFSRDEEHLISFNENNDTNAADYVEGMLLLNQPPLDLSFYPVSDKLRINSLVTQYGIIYIIELVKYYDNNPQAHVIEEVETLVKGLEYVPTFMFEKDVSYEEFLNRVHGEELVLRSKGLWEFPHPWLNVFVPRSRISDFNEGVFKGIILKQNITAGTALVYPMNRNKWDDRMSAVTPDEDVFYVVSLLHAASGFEQVKTFQAQNQQILQFCKDAGIKITEYLTGNKTHQEWVEHFGPKWKLIEDRKAQFDPKKILSPGQGIFK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2360 525 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 246 IPR036318 GO:0050660
Apr1g2360 525 Gene3D - 115 249 IPR016169 -
Apr1g2360 525 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 247 IPR016166 GO:0071949
Apr1g2360 525 SUPERFAMILY FAD-linked oxidases, C-terminal domain 248 524 IPR016164 GO:0003824|GO:0050660
Apr1g2360 525 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 525 - -
Apr1g2360 525 PANTHER GULONOLACTONE OXIDASE 8 525 - -
Apr1g2360 525 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 248 524 IPR015345 GO:0009690|GO:0019139|GO:0050660
Apr1g2360 525 Pfam FAD binding domain 66 123 IPR006094 GO:0050660
Apr1g2360 525 Pfam FAD binding domain 157 216 IPR006094 GO:0050660
Apr1g2360 525 Gene3D - 250 483 IPR016170 -
Apr1g2360 525 Gene3D - 46 524 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2360 Apr-Chr1 33264875 33272663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2360 K00279 - gmx:100793158 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2360 1 33264875 33272663 Apr1g2360 1 33264875 33272663 ECH
Apr9g2515 9 32377709 32382381 Apr1g2360 1 33264875 33272663 PCT