Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2514 ATGGATGAAAGATACCCTTTTTCTACCTACTTTATACTACTACTAATAACCATAACCCGTTTGATATCCACTGTGGGCAAAACAGAGTTATGGACGACTCTGCTAACACCAGAGCTTGCTAGTGTTGACAAAATATCCCACAAGTTCCATAACAACCCTGAAACCATTCAAATGGCTTCCAGGGACTACGGCAATATCGTGCATGAATTCCCAGCAGCAGTGTTTCATCCATCTTCTATACACGACATAGTAAGCTTGATAAAATCCTCATACAATAGCCATGACCCTTTCAACATAGCAGCAAGAGGCCAAGGTCACTCCACTAGTGGACAAGCCATGGCTCGTGATGGGGTAGTGGTTGACATGGCCAGTTTCAGAAAACAAAGAAATGGGGTTGTTATTAGTGTCTCTAAGGACCCTTTGATGGGTTATTATGCTGATGTTGGAGGGGAACAACTATGGATTGATGTGCTTCGCGCCACGCTTGACCATGGACTTGCACCCGTTTCTTGGACTGATTATTTGTACTTGACCGTGGGAGGGACACTTTCCAATGCTGGGATTAGTGGCCAGACTTTCCGCTATGGACCACAAATCAGCAATGTTCATGAAATGGATGTAATCACCGGAAAAGGAGAGTTCGTAACCTGCTCTTTACAGAAGAATTTGGAGTTATTTCATGCGGTTCTTGGAGGTTTAGGACAATTTGGAGTTATAACAAGGGCGAGAATTGCTCTTGAGCCAGCACCCAAAAGGGTTAAGTGGGTCAGACTACTTTATAGTGACTTTTCTGATTTCACCAAAGACCAGGAACGATTAATCTCAATCAATGGAAGGAAACAAAAGACTGCATTGGATTTTTTGGAAGGAATGCTGCTGATGCACCAAGGCTTCATAAATAATTGGAGATCCTCTTTCTTCCCTCTATCTGACCATCCTAGAATAGCTTCTCTAATAACTAAACATAGCATCCTCTATTGCCTTGAAGTGGCTAAATATTATGATGACCAATCCGAGAAAAATGTGAACAAGGAACTTCAAGACTTGCTCCAAGGACTAGCATATATCCCTGGATTTTATTATGAGAAAAATGTCACATATGTTGAGTTCTTGAATAGAGTCCGAAGCGGGGAGTTGAAGCTTCAGTCACAAGGACTGTGGGATGTTCCTCACCCATGGCTTAATTTGTTCGTACCAAAATCTCAAATCTTTGATTTTAATTCTGGCGTATTCAAAGATATAATTCTTAAAAGAAACATCTCCAATGGACCTGTCTTGGTTTACCCCATGAATAGAAACAAGTGGGACGATAGGATGTCAGCACCTATTCCAGATGAGGATGTTTTCTACACAGTTGGATTTCTGCACTCAAGTGGGTTTGATAATTGGAAGGCATATGATGCTCAAAACAGGGAAATTTTGAAGTTTTGTAGAGATGCTGGCATTAAGGTTAAGCAATATCTTGCCAACTACAACACACAGGAAGATTGGAAAAACCATTTTGGTGCTAAATGGAGGAGTTTTTTAGAAAGAAAACATCAGTTTGATCCTAGAATGATTCTATCACCTGGACAAAAAATCTTTGACAACAGTTATAAGCAGCTTTTTAAATATTTTCCTCAATGA 1626 0.4053 MDERYPFSTYFILLLITITRLISTVGKTELWTTLLTPELASVDKISHKFHNNPETIQMASRDYGNIVHEFPAAVFHPSSIHDIVSLIKSSYNSHDPFNIAARGQGHSTSGQAMARDGVVVDMASFRKQRNGVVISVSKDPLMGYYADVGGEQLWIDVLRATLDHGLAPVSWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVHEMDVITGKGEFVTCSLQKNLELFHAVLGGLGQFGVITRARIALEPAPKRVKWVRLLYSDFSDFTKDQERLISINGRKQKTALDFLEGMLLMHQGFINNWRSSFFPLSDHPRIASLITKHSILYCLEVAKYYDDQSEKNVNKELQDLLQGLAYIPGFYYEKNVTYVEFLNRVRSGELKLQSQGLWDVPHPWLNLFVPKSQIFDFNSGVFKDIILKRNISNGPVLVYPMNRNKWDDRMSAPIPDEDVFYTVGFLHSSGFDNWKAYDAQNREILKFCRDAGIKVKQYLANYNTQEDWKNHFGAKWRSFLERKHQFDPRMILSPGQKIFDNSYKQLFKYFPQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2514 541 Gene3D - 252 487 IPR016170 -
Apr9g2514 541 Pfam FAD binding domain 71 218 IPR006094 GO:0050660
Apr9g2514 541 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 71 106 IPR006093 GO:0016491
Apr9g2514 541 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 250 528 IPR015345 GO:0009690|GO:0019139|GO:0050660
Apr9g2514 541 Gene3D - 122 251 IPR016169 -
Apr9g2514 541 SUPERFAMILY FAD-linked oxidases, C-terminal domain 250 528 IPR016164 GO:0003824|GO:0050660
Apr9g2514 541 PANTHER GULONOLACTONE OXIDASE 11 528 - -
Apr9g2514 541 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 11 528 - -
Apr9g2514 541 Gene3D - 53 528 IPR016167 -
Apr9g2514 541 ProSiteProfiles PCMH-type FAD-binding domain profile. 67 249 IPR016166 GO:0071949
Apr9g2514 541 SUPERFAMILY FAD-binding/transporter-associated domain-like 47 248 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2514 Apr-Chr9 32370359 32373771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2514 K00279 - gmx:100787676 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2514 9 32370359 32373771 Apr9g2514 9 32370359 32373771 ECH
Apr9g2514 9 32370359 32373771 Apr1g2361 1 33286019 33290305 PCT