Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2361 ATGGTTGAGAACTACCCGTTTCCCACATACTTCATTCTCCTACTAATAACCATAACACGTTTGATCTCCACAGTGGGAAAAACGGAGCAATGGAACAAAGCTCTGCTCCCCCAAGAGTTAACCACTGTGGAGGAAAAGCTATCAAACGCGCTCCGTTACGACCCTGAAGCCCTGGAAGGAGCTTCAAAGGACTACGGCAACCTCGTACGCGATGTCCCATTAGCGGTGTTTCGTCCATCATCGGTGTACGACATAGTGAGGCTGATAAAGGTGTCGTACAATAGCTCTGTCCCTTTGCGCATAGCGGCGAGAGGGGAAGGGCACTCCACTCGCGGACAAGCGATGGCACGTGAGGGTGTGGTGGTGGACATGGCGGGGTTGAGAAAGGGAGAGAATGGGGTTGGAATAAGGGTCTCTGTGGACCCTTTGGTTGGTTACTATGCTGATGTTGGAGGGGAGCAATTGTGGATTGATGTGCTTAATACAGCTCTTGAGCATGGACTTGCACCTCTTTCTTGGACTGATTACTTGTACTTAACTGTGGGAGGAACTCTCTCCAATGCTGGCATCAGTGGCCAAACATTCCGCTATGGACCTCAAATCACCACTGTTCGTCAATTGGATGTTGTCACTGGAAAAGGAGATTTTGTGACCTGTTCTTCGGAGACGAATTCGGAGTTATTTCACGCGGTTCTTGGAGGCTTAGGACAATTTGGAATTATAACAAGGGCAAGAATTGCTCTTGCGCCAGCACCGAAGAGGGTTAAATGGGTGAGACTATTGTACAATGACTTTTCTGCTTTTGCCAAAGACCAGGAACAATTAATCTCAATCGATGGAAGGAAACAAAATTTTGCATTGGATTATTTGGAAGGGATGCTACTAATGCACCAGGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATCCCCGAATAATTTCGCTAGTAACTAAACATAGCGTCCTCTATTGCCTAGAAGTTGCCAAATATTATGATGGCCAAAATGAAAACAATGTGGACAAGGAACTCCAAGTTTTGCTCCAAGGACTAAACTATATCCCTGGATTTTACTATGAAAAAGATGTCTCCTATGTTGAGTTCTTAAATAGAGTCCGAAGTGGAGAGTTGAAGCTTCAGTCACAAGGACTGTGGGATGTTCCTCATCCGTGGCTTAATATGTTTATACCGAAATCTCAAATATTGGATTTTGACTCGGGCGTGTTCAAGAATATCATCCTTAAACGAAACATCACCACAGGACCTGTCTTGGTTTACCCCATGAATAGAAACAAGTGGGACAACAGGATGTCAGCATCAATACCAGATGAGGATATCTTCTACACAGTTGGATTTTTGCATTCTAGTGGGTTTGATAATTGGAAGGCCTATGATGCTCAAAACAGAGAAATTTTGCAATTTTGTAATGATGCTGGGATCAAGGTTAAGCAATATCTTCCCCACTATCGCACACAAGAAGATTGGGCGAACCATTTTGGCCCTAAATGGAGAACTTTCTTAGAAAGAAAACACCAGTTTGATCCAAGAATGATTCTATCACCTGGACAAAGAATCTTCAACAACAATTAA 1602 0.4401 MVENYPFPTYFILLLITITRLISTVGKTEQWNKALLPQELTTVEEKLSNALRYDPEALEGASKDYGNLVRDVPLAVFRPSSVYDIVRLIKVSYNSSVPLRIAARGEGHSTRGQAMAREGVVVDMAGLRKGENGVGIRVSVDPLVGYYADVGGEQLWIDVLNTALEHGLAPLSWTDYLYLTVGGTLSNAGISGQTFRYGPQITTVRQLDVVTGKGDFVTCSSETNSELFHAVLGGLGQFGIITRARIALAPAPKRVKWVRLLYNDFSAFAKDQEQLISIDGRKQNFALDYLEGMLLMHQGPINNWRSSFFPLADHPRIISLVTKHSVLYCLEVAKYYDGQNENNVDKELQVLLQGLNYIPGFYYEKDVSYVEFLNRVRSGELKLQSQGLWDVPHPWLNMFIPKSQILDFDSGVFKNIILKRNITTGPVLVYPMNRNKWDNRMSASIPDEDIFYTVGFLHSSGFDNWKAYDAQNREILQFCNDAGIKVKQYLPHYRTQEDWANHFGPKWRTFLERKHQFDPRMILSPGQRIFNNN* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2361 533 SUPERFAMILY FAD-linked oxidases, C-terminal domain 252 531 IPR016164 GO:0003824|GO:0050660
Apr1g2361 533 Pfam FAD binding domain 73 220 IPR006094 GO:0050660
Apr1g2361 533 Gene3D - 124 253 IPR016169 -
Apr1g2361 533 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 250 IPR036318 GO:0050660
Apr1g2361 533 Gene3D - 254 489 IPR016170 -
Apr1g2361 533 PANTHER GULONOLACTONE OXIDASE 11 531 - -
Apr1g2361 533 Gene3D - 54 530 IPR016167 -
Apr1g2361 533 ProSiteProfiles PCMH-type FAD-binding domain profile. 69 251 IPR016166 GO:0071949
Apr1g2361 533 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 11 531 - -
Apr1g2361 533 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 252 530 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2361 Apr-Chr1 33286019 33290305 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2361 K00279 - gmx:100804431 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2514 9 32370359 32373771 Apr1g2361 1 33286019 33290305 PCT