Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2477 ATGGCTTCAACTTCAGCAATTTCAATGGCCGTACCACTAACTCACGCCAGCCAGAAGAGAGTGGTGCCTAGCTCTGAGGCATTCCTCAAGGCACCATTGCCTCTGCGGCCTTCAAAAGCTGTGGCAGCGTCAAAACCCAATGGAAGGTTTCAAGTGAGGGCGTCCATGAAAGAGAAAGTTGTGACAGGGTTGACAGCAGCTGCATTGACGGCTTCAATGATGGTTCCGGATGTGGCTGAAGCTGCTGTTACACCTTCCCTCAAGAACTTCTTGCTCAGCATCGTGGCTGGTGGAGTTGTGGCTGCAGCAATTGTTGGTGCCGTGATTGGTGTCGCCAATTTCGATCCCGTCAAGCGAAGCTGA 363 0.5234 MASTSAISMAVPLTHASQKRVVPSSEAFLKAPLPLRPSKAVAASKPNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAAVTPSLKNFLLSIVAGGVVAAAIVGAVIGVANFDPVKRS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2477 120 Pfam Photosystem II reaction centre X protein (PsbX) 83 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
Apr9g2477 120 PANTHER EXPRESSED PROTEIN 1 120 - -
Apr9g2477 120 PANTHER OS07G0673550 PROTEIN 1 120 - -
Apr9g2477 120 Gene3D Single helix bin 82 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2477 Apr-Chr9 32098660 32102632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2477 - - gmx:100306291 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2477 9 32098660 32102632 Apr1g2397 1 33605300 33605994 PCT