Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2397 ATGGCTTCCACTTCTGCAGTTTCAATGGCTATGCCACTAACTTATGCCAGCCAGAAGAGGATGGTGCCTAGCTCTGATGCATTCTTGAAGCCACAGCCTCTACGGTCTTCAAAGGCAGTGACAGTTTCAAAACCCAGTGAAAGGTTTCAAGTCAGGGCCTCCATGAAGGAGAAAGTTGTGACAGGGCTCACAGCAGCTGCATTGACAGCATCACTGATGGTTCCTGATGTGGCTGAAGCTGCTGTTACGCCTTCTCTCAAGAACTTCTTGCTCAGCATCGTGGCTGGTGGAGTTGTGCTTGCTGTCATAGTCGGTGCCGTGATCGGTGTTTCCAATTTCGATCCCGTCAAGCGAAGCTAG 360 0.5056 MASTSAVSMAMPLTYASQKRMVPSSDAFLKPQPLRSSKAVTVSKPSERFQVRASMKEKVVTGLTAAALTASLMVPDVAEAAVTPSLKNFLLSIVAGGVVLAVIVGAVIGVSNFDPVKRS* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2397 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Apr1g2397 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Apr1g2397 119 Gene3D Single helix bin 81 119 - -
Apr1g2397 119 PANTHER OS07G0673550 PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2397 Apr-Chr1 33605300 33605994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2397 - - gmx:100306291 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2397 1 33605300 33605994 Apr1g2397 1 33605300 33605994 ECH
Apr9g2477 9 32098660 32102632 Apr1g2397 1 33605300 33605994 PCT