Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2474 ATGCTGTGTCTGAGAACGCAGGTGTCATCTCCTTTTTCTCTGACTCTCTCGGCTTGCAAACAGATCCGTCAGGTAAAGGCGTTATCCTCTAGATCTTCGATCAAGATGACGTCAAGTCAAACCGTGGAGCACATTGTGCTGTTCAAGGTGAAAGAGGAGACGGAGGAGTCAAAGGTGAGTGCGATGATGAACGGATTGAGCTCCCTGGTGTCGTTGGAGCAAGTTGTCCACCTAAGCGTGGGTCCACTCCTACGCAACCGATCCTCCTCCTTAACCTTCACTCACATGCTCCACAGTCGCTACAAGTCCAAAGAGGATCTCGAAGCCTATTCCGCGCACCCTAGCCACGTCAGCGTCGTCAAGGGACACGTGCTCCCCATCATCGACGACATCATGGCCGTCGATTGGATCGCCCACGACCTTCGTGGTGATCTCGTTCCGCCCCAGGGTTCGGCGATTCGAGTGAGTTTCTTGAAATTGAAAGAGAACGCGGTTAGGGATGAGGTGCTAGGTGTTGTTAGAGGGATTCCCCAGAGTTTCAAGCAAATTAGTCAGCTGAGTTGCGGGGATAATTTCTCGCCGGCGAGGGCTAAAGGTTTCTCGATTGCTTCCCTCGCGGTTTTTCCGGAACCCAGCGAGTTGGAAGCGGTGGATTTGAACGAGGAGTTGGTGAACCATCAGAAGGATAAGGTTAGGGATCACATCGAGAGTGTGGTCGTAGTTGATTATGTGGTGCCGCCGCCTCCTCCTCAGTCTGCAAGCCTTTGA 768 0.5273 MLCLRTQVSSPFSLTLSACKQIRQVKALSSRSSIKMTSSQTVEHIVLFKVKEETEESKVSAMMNGLSSLVSLEQVVHLSVGPLLRNRSSSLTFTHMLHSRYKSKEDLEAYSAHPSHVSVVKGHVLPIIDDIMAVDWIAHDLRGDLVPPQGSAIRVSFLKLKENAVRDEVLGVVRGIPQSFKQISQLSCGDNFSPARAKGFSIASLAVFPEPSELEAVDLNEELVNHQKDKVRDHIESVVVVDYVVPPPPPQSASL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2474 255 PANTHER - 23 254 IPR044662 -
Apr9g2474 255 Gene3D - 33 139 - -
Apr9g2474 255 SUPERFAMILY Dimeric alpha+beta barrel 40 139 IPR011008 -
Apr9g2474 255 Gene3D - 152 247 - -
Apr9g2474 255 ProSiteProfiles Stress-response A/B barrel domain profile. 42 136 IPR013097 -
Apr9g2474 255 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Apr9g2474 255 SMART Dabb_2 42 138 IPR013097 -
Apr9g2474 255 SMART Dabb_2 152 245 IPR013097 -
Apr9g2474 255 ProSiteProfiles Stress-response A/B barrel domain profile. 152 243 IPR013097 -
Apr9g2474 255 SUPERFAMILY Dimeric alpha+beta barrel 153 249 IPR011008 -
Apr9g2474 255 Pfam Stress responsive A/B Barrel Domain 154 245 IPR013097 -
Apr9g2474 255 Pfam Stress responsive A/B Barrel Domain 42 137 IPR013097 -
Apr9g2474 255 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 23 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2474 Apr-Chr9 32081207 32083551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2474 - - gmx:100527770 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2474 9 32081207 32083551 Apr9g2474 9 32081207 32083551 ECH
Apr9g2474 9 32081207 32083551 Apr1g2401 1 33630576 33632763 PCT