Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2469 ATGGAGTTGTTACCAACCAAAGAGAAGAGAATCTTGGAAGTGATGAGTGCAGTAAGAAGCAGCGGCTACAACGAAACAAGGAAGGGACAAATGACTGGAATGGCAAAGGAAGAAGGGTCAGCTAGTCCTAGCTGGGGTGCTACATTTTTTATGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCTGCGGCTGTTAACTCTCCAATGTCGTCAAAAGATGATAATAGCAGTAGCCAGCTTCAAAGGCTGCAGTATCAACTTACAAAAATGTTAAAAGGCTTTTCGCGGACTCCTGATGTTGAAAACACCAATTACAATCCTGAGATTCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGCATATGGACCATAGGTTTTGGAAGGAGCCCTCACGACTGTTTGAGAGCATGGTGGTAGTCGGACTTCATCCTAATTGTGATGTTCAGGCACTGCAAAGGCAATATGTTAATCGAAAGTCTGAAGGCTCTGGTAGATTGAGAAGTGCACTTGGTTATCAGAATCAATCTCGTGTTGAACCCAACATTGAACCGCAGGTCTTATTTGTTTACCCTCCAGAAAAACATCTGCCTCTTAAATGCAAGGATCTTCTTTCTTTCTGCTTCCCTGGAGGCTTAGAGGTCCGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGAGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGATGTTGTGTCTTAGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTCTCTCTGTTTTCTGATAAGCAGCCATCTAGCTCTTACTCTTCTTTTAGACGACATATATTAACTACTCAGAGATGTTACTGCATTCTTTCAAGGCTTCCAGCTTTTGAATTGCACTTTGGTGTGTTAAATAGCATCTTCACTCAAGAAAGGCTAGAGCGGTTGACAAGAAGTGTTGGGGATTTAGATTTAGAATTTGTCGAAGGTAACTATGAGGGAGAAAACTCAGAGGGATATTCAGACTCAGAAAGTGTTGTGGTGAACAATGAACCAACAGAAGACAGACTTGATGCAAATCCAATAATATCTCAATCAAGAGTGAGGGAGTCTACACCTGAAAACAGTCTGGATGATGGTCAACCAGAGCACATAATGGTTGATGGGGAGCTGCACAAATTTAAGGAGAGAATAAATTATGACAGTAGTTTTCTTACTGGTCCTGTAACTGATAAGACAACGGCCAAAGTAGAATCTGTCCCTACAAATTCTGAAGAAGGCTATCAGTGTGGGGATACTTTTGCAACTAACAAACAATCAGAAGACAGACAGTTACCTAATGCTATTTTGCCCCTACTGCGCTTTTGCCAATATGAAAGTTCTGACTCTTCCTGCAGTATTCAAGGCTCGCCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGAAAATGAGACAGAAGATGCATCTTTCTCTGGCCAGGAGGATTTGAATGACTTCAATGATATTCTTGAATGGGCTAAGGAAAATAACCATGGACCACTACAAATTATAAGCAAGTATTACCGTTTAAGTTGCCCTGCCAGGGGCTCGTCTCTTACATTTCATCCTTTGGAGCACTTGTATCCCTTGGAATATCACAGACCAGCTGAGACAGTTCTACGTCTTGCTGGTTCAACAGTTGATTTGAAAACTTCCAGTACTGGTCTGGAATTAACTGATGCATATAATGCTCTTCTGGTGGAAGAGGCAACTGCGTTATCTGTATGGGCTGTGGCTTGCTTATGTGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGCATTCTACTAGAGAAACAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCTTATAGATGGCAAAGCCTGCTAATGCCAGTTTTACCAAATGACATGCTCGAGTTTTTGGATGCACCTGTCCCATATGTAGTTGGTATCAAGAACAAGACCAGTGAAGTTCAGTCAAAGTTTAGCAATGTTATTCTGGTTGATGCCAATAAAAATCAGGTGAAGTCACCAACAATACCTCAACTGCCAAGACAGAAAGAACTACTCTCTTCTTTACGTCCTTATCATGCAACCCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGGCCTGTGTTTGAATGCACAGAAGTGCAGATTGAAGCTGCGAAAGGGTTTCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTGTAACATACGTTCTCACACAATTACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCATTCCCTTACCGTGATCGGCCTTTTATGAAGCTTTTCGTGGATACGCAGCTTTTTTCTGTACATACAGACCTTGTGCTCTCTTTCTTACAAAAGGAATAG 2499 0.4154 MELLPTKEKRILEVMSAVRSSGYNETRKGQMTGMAKEEGSASPSWGATFFMQTTEDVARAVAAAVNSPMSSKDDNSSSQLQRLQYQLTKMLKGFSRTPDVENTNYNPEILTSLKRQWAANFQLQHMDHRFWKEPSRLFESMVVVGLHPNCDVQALQRQYVNRKSEGSGRLRSALGYQNQSRVEPNIEPQVLFVYPPEKHLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLFSDKQPSSSYSSFRRHILTTQRCYCILSRLPAFELHFGVLNSIFTQERLERLTRSVGDLDLEFVEGNYEGENSEGYSDSESVVVNNEPTEDRLDANPIISQSRVRESTPENSLDDGQPEHIMVDGELHKFKERINYDSSFLTGPVTDKTTAKVESVPTNSEEGYQCGDTFATNKQSEDRQLPNAILPLLRFCQYESSDSSCSIQGSPCEDRNFRSDVDENETEDASFSGQEDLNDFNDILEWAKENNHGPLQIISKYYRLSCPARGSSLTFHPLEHLYPLEYHRPAETVLRLAGSTVDLKTSSTGLELTDAYNALLVEEATALSVWAVACLCGTLRLENVLTFFAGILLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSEVQSKFSNVILVDANKNQVKSPTIPQLPRQKELLSSLRPYHATLVGESYLGRRRPVFECTEVQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDLVLSFLQKE* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2469 832 Pfam DENN (AEX-3) domain 606 705 IPR001194 -
Apr9g2469 832 SMART uDENN_cls 134 267 IPR005113 -
Apr9g2469 832 Coils Coil 826 832 - -
Apr9g2469 832 SMART DENN_cls 298 706 IPR001194 -
Apr9g2469 832 MobiDBLite consensus disorder prediction 367 397 - -
Apr9g2469 832 Gene3D - 125 335 - -
Apr9g2469 832 Pfam uDENN domain 188 265 IPR005113 -
Apr9g2469 832 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 31 832 - -
Apr9g2469 832 PANTHER DENN (AEX-3) DOMAIN PROTEIN 31 832 - -
Apr9g2469 832 Gene3D - 602 768 IPR043153 -
Apr9g2469 832 ProSiteProfiles Tripartite DENN domain profile. 172 832 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2469 Apr-Chr9 32031295 32043663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2469 - - aprc:113848505 1642.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2469 9 32031295 32043663 Apr9g2469 9 32031295 32043663 ECH
Apr9g2469 9 32031295 32043663 Apr1g2405 1 33670780 33684861 PCT