Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2405 ATGGCGAAGGAGGAAGAGTCGGGTAGTCCTAGTTGGGGTGCTTCGTTTTTTATGCAGACAACAGAGGATGTGGCTAGAGCTGTTTCTGCTGCTATGAATTCTCCAAGGCCATCTGTGATATATTCATCGAAAGATGATCATGGTGGTAGTCAACTTCAAAGGCTGCAGCATCAAGTTAAAAAAATGATTAAAGGATTTTCTCGCCCTTCTGATGTTAAATATACAAATTACAATCCAGAAATCTTGACAACACAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGAACATGGACCATAGGTCTTGGAAGGAGCCAACAAGGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATATTTTGTTAGAAAGTCTGAAGGCTCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAATCCCGTGTAGAACCCAATCTTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACGGCTGCCTCTTAAAGACAAGGATCTTCTCTCTTTCTGCTTTCCTGGTGGCATGGAGGTTAATGCTATTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTTTCTTTGGGCAGGAGCACCTTAAACAAAGGGATTTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGCTGTGTCTTAGTTGAAGAGCTAGTGCAAAAACCGTCTGGATTTCTCTCCCTTATTTCAGATAAACAGTTGACTTACTCCTCTTTGAGACGCCATACATTTACTACACAGAGATGTTATTGCATTCTCTCAAGGCTGCCATTTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGAATAGTGTTGGAGATTTAAATTTAGTTGTTGAAGGCAGTTACGAGGAAGAAAACTTAGGGGGAAATTCAGAGTGTGTGTTGGTGAATGATAGATTAACAGAAGACAAACATGATGAGAATCTAAGAATTTCTCAATCAAGCCTTAGAAATTCCTCCACTGAAAAAATTGAGGGTGATGGTAATAATCCCGATAAACAAATGGCTAATGGGGAGCTGCATACATTTAAGGAGAGAGTCAATGATGACAGTGTTGTGCCAATTGATCCTGAAGCTGTTAGAAAGCCTGTCAAAGAATCTGGCCCTACAAATGCTGAAGATAGTGATCTATATGGAGATGCTTTTGTAACTAACAAACAATCTGAAGAGAAGCGTTTACCAAATGCTATTCTGCCACTCCTACGCTGTTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTGTTCAAGGTTCTCCTTGTGAAGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACTGAAGATGCTTCAATCTCTGGCCAAGAGGATTTAAATGACCTACATGATATTCTTGAATGGGCTAAGATTGTGAGTGAGTATTATCACTTAAATTGCCCTGCAAGGGGCTCAGCACTTAGGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAATATCACAGACCAGATGAGTCAGTTCTACATGTTACTGGTTCAACTGTTGATTTAAAATCTTGTAGTTCAGGTCTGGAAATAGCAGAGGCACATAACTCTCTTCTGGCTGAGGAGGAGGCAACTGCATTATCTGTATGTGCTATAGCATGCCTATGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCTGGAGCTTTACTGGAAAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGGTTCAATTTTATCAGTTATTCCACTGATCCGGCCCTACCAATGGCAAAGCCTACTAATGCCGATTTTACCAAATGACATGCTTGAGTTTCTGGATGCCCCTGTCCCGTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACCAATAATGTTATACTCATTGATGCCAATCGAAACCAGGTGAAGTCATCAACAATACCTCAACTGCCAAGACAGAAAGAGTTAAGCGCTTCTTTACGTCCTTATCATGCAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGCAAGTGCAGATAGAAGCTGCCAAGGGGTTCTTATCGGTGATAAGGTCTTATTTGGATTCCCTTTGCTATAATATCCGTTCTCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTATGAAGGAGAGTTTCATTGACTCATTCCCTTACCGAGACCGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTACATACAGATATTGTTCTCTCTTTCTTCCAAAAGCAATAG 2382 0.4093 MAKEEESGSPSWGASFFMQTTEDVARAVSAAMNSPRPSVIYSSKDDHGGSQLQRLQHQVKKMIKGFSRPSDVKYTNYNPEILTTQKRQWAANFQLQNMDHRSWKEPTRLFESMVVVGLHPNCDIQALQRQYFVRKSEGSGKLRSALGYQNQSRVEPNLEPQVLFVYPPEKRLPLKDKDLLSFCFPGGMEVNAIERTPSMSELNEIFFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGFLSLISDKQLTYSSLRRHTFTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTNSVGDLNLVVEGSYEEENLGGNSECVLVNDRLTEDKHDENLRISQSSLRNSSTEKIEGDGNNPDKQMANGELHTFKERVNDDSVVPIDPEAVRKPVKESGPTNAEDSDLYGDAFVTNKQSEEKRLPNAILPLLRCCQYESSESSCSVQGSPCEDRNFRSDADDTETEDASISGQEDLNDLHDILEWAKIVSEYYHLNCPARGSALRFHPLEHLHPLEYHRPDESVLHVTGSTVDLKSCSSGLEIAEAHNSLLAEEEATALSVCAIACLCGTLRLENVLTFFAGALLEKQIVVVCSNLGILSGSILSVIPLIRPYQWQSLLMPILPNDMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDANRNQVKSSTIPQLPRQKELSASLRPYHATLVGESYLGRRRPVYECTQVQIEAAKGFLSVIRSYLDSLCYNIRSHTITNVQSNDDKVSLLMKESFIDSFPYRDRPFMKLFVDTQLFSVHTDIVLSFFQKQ* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2405 793 SMART uDENN_cls 106 239 IPR005113 -
Apr1g2405 793 Pfam DENN (AEX-3) domain 551 665 IPR001194 -
Apr1g2405 793 MobiDBLite consensus disorder prediction 390 411 - -
Apr1g2405 793 MobiDBLite consensus disorder prediction 349 370 - -
Apr1g2405 793 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 792 - -
Apr1g2405 793 Gene3D - 563 729 IPR043153 -
Apr1g2405 793 ProSiteProfiles Tripartite DENN domain profile. 144 793 IPR037516 -
Apr1g2405 793 SMART DENN_cls 268 667 IPR001194 -
Apr1g2405 793 Gene3D - 97 309 - -
Apr1g2405 793 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 792 - -
Apr1g2405 793 MobiDBLite consensus disorder prediction 445 476 - -
Apr1g2405 793 Pfam uDENN domain 160 237 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2405 Apr-Chr1 33670780 33684861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2405 - - gmx:100782148 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2405 1 33670780 33684861 Apr1g2405 1 33670780 33684861 ECH
Apr9g2469 9 32031295 32043663 Apr1g2405 1 33670780 33684861 PCT