Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2466 ATGCTTCCAACCAAACCCAATCGAAAACAACCTCCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCATCATCATCATATATTCCTCAATCACTTCCGATTCCAATTTCTAATTCTCCTTCGATTGCCGATTCTGACCTAGACATTGCTACAATGATCGCTCACTTTCTCGACCAACCTAACGCCTCTCCTCTCCATCATCATCATCATCATCATCAGTCTAACGATAACGGAGATCAACCAGAGGCCAGAGAATTTCTCAAGAGAGAATTTGATAGCGCCGTTGATTTTTTCGCCACCGACGATTTTGCCGCCGTCAAGCGTACTAGGATTAATGACAACGCCGGCAACGACGATTCCAACGCCGTTAGATTCGCCTTTGAGTTACACGGTGGCGGTGAGAGGAAGGAGCCACTAGTTGAGATTGATTTTTTATCCAATGCTTTTCGTGAAGACGTATTGGCCTTAGAACTCGGAAACCAGGATTCCGACACTGACACAGACATCGACGTTCTACCCTACCACCGCCAAACAGTGCATGAGTTCAGAAGGAATCAGATTATAAAACGTTTCCGACAAACCGCCAAGGAAAATGCATCACGCTTTGCACGTTTTGAAACTGATGTTAAAGATGAAGGGGAAGAAGGGATTGGAATTGATGATAGTTCAAGTTCTACCCCTTTTGCTATAGCTATGAGAGCTATCAAGGATCGAGAGATGAAAATTTCGCAAAAGGGGTGTGTTCCTGCTTCTTCCGTTACATGGGTTTCTAAGAGGAATCAAGAAGGTGCAGGGTTGAGGTTTCGGGTTCCCTCTTTGCGTGAATTGTCCCTTAAAGTTCTCGCTGACAATGCTGATGCAATTGTTTCGCTTGAGGGTGTTCCGGATGAACTGAGGCACAGGCTTAGCCAGTTGCTGTGCGATTCGAGAAAGATGAACATTCACTTTTTCGAACTTCTTCTTGATGGGTCTTCGTCTCCTACGGAGATAAGGCTGAAAGATTGTTCGTGGTTGACGGAGGAACAGTTCACGAAGTGTTTTCAAACGTGTGACACTAGCAGATTGGAGGTGCTACAACTTGACCAGTGTGGACGGTGTATACCTGATTATGCATTACATGCTACCTTGGCTCGGTCAGCAAGGTGGTTGCCTAGATTAACTAGTCTGTCCCTCAGTGGTGCGTGCCGTCTTTCAGATAAGGGGTTACAAGTACTAGTTTCTTCTGCCCCAGTACTTAGATCGATAAATCTAAGCCAGTGCTCCCTTCTCACATCTGCCAGTCTTAATATTTTGGCCAATTCACTAGGATCACTTCTGAAAGAGTTGTATCTTGATGATTGCCAAATCACTGATGCTGCACTAATTGTGCCAGCACTGAAGAAATTGGAACATTTAGAAGTATTGTCATTGGCTGGTATTCAAACTGTCTGTGATGAATTTATCAAGGACTACATCACTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTATAAAATTGACTGATGCATCAATAAAAGTCATTGCTGAACACTGTCCTGGGTTGTGCGCACTTGATCTTATGAACTTGCACAAATTGACTGATTTATCTGTAAGATATCTTACAAACAATTGTCAAGCACTTCACACTTTGAAGCTCTGCCGCAATTCGTTCAGCGATGAAGCAATTGCTGCTTTTTTGGAGATCAAGGGAGAGTCCATGAAAGAACTTTCACTTAACAACATTAAGAAGGTTGGCCACCACACAACGTTGTCACTTGCTAGGCATGCAAAAACGTTGCATACTTTAGATCTATCTTGGTGCCGAAATTTGATGGACAATGAACTGGGTTTGATTGTTGATAGCTGCTTCTCGCTGAGGTTACTGAAACTTTTTGGATGCTCGCAGGTAACAGACGTTTTTATGAACGGGCACTCAAACCTAGAGATTCAGATCGTTGGATTGAAGATGTCTCCTTTATTGCAACATGTCAAAGTACCCGATTCCCCTCAACGTGCTTTGCGTTACCAGTCTCAGTAG 2037 0.4359 MLPTKPNRKQPPSSSSSSSPSSSSPSSSSYIPQSLPIPISNSPSIADSDLDIATMIAHFLDQPNASPLHHHHHHHQSNDNGDQPEAREFLKREFDSAVDFFATDDFAAVKRTRINDNAGNDDSNAVRFAFELHGGGERKEPLVEIDFLSNAFREDVLALELGNQDSDTDTDIDVLPYHRQTVHEFRRNQIIKRFRQTAKENASRFARFETDVKDEGEEGIGIDDSSSSTPFAIAMRAIKDREMKISQKGCVPASSVTWVSKRNQEGAGLRFRVPSLRELSLKVLADNADAIVSLEGVPDELRHRLSQLLCDSRKMNIHFFELLLDGSSSPTEIRLKDCSWLTEEQFTKCFQTCDTSRLEVLQLDQCGRCIPDYALHATLARSARWLPRLTSLSLSGACRLSDKGLQVLVSSAPVLRSINLSQCSLLTSASLNILANSLGSLLKELYLDDCQITDAALIVPALKKLEHLEVLSLAGIQTVCDEFIKDYITARGHNMKELVLKDCIKLTDASIKVIAEHCPGLCALDLMNLHKLTDLSVRYLTNNCQALHTLKLCRNSFSDEAIAAFLEIKGESMKELSLNNIKKVGHHTTLSLARHAKTLHTLDLSWCRNLMDNELGLIVDSCFSLRLLKLFGCSQVTDVFMNGHSNLEIQIVGLKMSPLLQHVKVPDSPQRALRYQSQ* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2466 678 MobiDBLite consensus disorder prediction 1 35 - -
Apr9g2466 678 SUPERFAMILY RNI-like 354 645 - -
Apr9g2466 678 Gene3D Ribonuclease Inhibitor 484 669 IPR032675 -
Apr9g2466 678 Gene3D Ribonuclease Inhibitor 269 483 IPR032675 -
Apr9g2466 678 SMART LRR_CC_2 518 543 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 386 411 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 439 463 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 412 437 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 622 647 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 544 568 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 596 621 IPR006553 -
Apr9g2466 678 SMART LRR_CC_2 492 517 IPR006553 -
Apr9g2466 678 PANTHER UNCHARACTERIZED 164 676 - -
Apr9g2466 678 MobiDBLite consensus disorder prediction 64 84 - -
Apr9g2466 678 PANTHER F-BOX/LRR PROTEIN 164 676 - -
Apr9g2466 678 MobiDBLite consensus disorder prediction 7 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2466 Apr-Chr9 32007337 32012557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2466 K15082 - gmx:100798274 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2466 9 32007337 32012557 Apr9g2466 9 32007337 32012557 ECH
Apr9g2466 9 32007337 32012557 Apr1g2409 1 33710946 33716351 PCT