Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2409 ATGGTTCAAACCAGAGCAACCCCTAAACCCTCCAAATCCAACCACATCCACCCTCTCACTCCAGCTCAAACCCACGAATCTTCTTCCCTTTCCGCCACCGCTTCTCTTCCCCTCACCTCCCCCCTCCTCCGCCGCAGCCTCCGCCTCGCCTCCCTCTCTGACTCCGATCCTCCCCCCCCCCCCGCCACTACTCCCGATTCCTCCGTTAGGGTTTCCACTGGCAACCGGAAGCGAAAGACCGACTTAACCGGCTCAGAACGCGATGTTGACCAAAGGGCAAAGGGTTTTCTAAACTTGAGATCAGGAAAAAAAGTTCTCAAGCGAGCAATGGCCAACGATTCACTTAACGATTACAAAAGTGAAAACGGTGAAGCGAAGAATGACTCGCCGGAGACTAGTAATGACGTGGATGGTGAAGTTCGAACAAGACAACTCAGCAGAGAAGAGAAAGGAAAAGCTGTGGTGGTTGATGGCTCCTCGCGGGAAGAATCCAAAGCGGAGAACTCAACCGTCGACGTTACTGCAGATGCAGATAATGGAGCTTCGCATGTTCGAGAACGTTCCAGAAGCTCTATCACGAAAGAGCGGGGTTCCGGTTCCCGGAGGAACGGTTACATGGAACGCTTCCACGACATAGCGAGGGAGAACGCGTCTCGGTTCGCTCATTTTGAACCGGAAGAAGAAAACGATGACCACCCACCTCCGGTTTTCGAAGAGCCACATGACGAAATTGAGGACTGGCCTGGTCCTTTCTCCACAGCTATGAAAATAATCAAAGACAGAGGGATGAAACTGCAGAACGTTGGAATGGGACGCGATACATCGCGAACGAACTTATGTGAATCTATTTCTTGGGTTCCTAAAGCGAAGGTAGGGAATGCTGGTGTTAGCGTTTCGGTTCCGTCTTTGCAAGAAATGTGCCTTAAGATTCTCTCGAAGAACGTTGATGCAATTGTTTCGCTGGAGAGTGTGCCTGATGTTCTGAGACACCGGCTTAGCCAGTTGCTCTGCGACTCGAGGAAGATGAACAGCCACTTTTTTGAACTTCTGGTGCGTGGAACTCCCACTGAGATTCGGTTAAGGGATTGCTCGTGGTTGACGGAGGAACATTTTACCGAGTGTTTTCAAATGTGTGACACTTCAAATTTGGTGGTACTACAACTTGACCAGTGTGGGCGCTGTTTGCCAGATTATGTAATAGTTGCTACTTTGGCTAAGTCACCAAGGCATTTACCTAGATTAACTACTCTATCCTTTAGTGGTGGGTGTCGTCTTTCAGATGGGGGTTTGCGTGCACTTGTTTCTTCTGCTCCAGCACTTAGATCAATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTCTTTATATTTTAGCTGAATCACTAAGATCTCTTTTGAAAGAGTTGTACCTTGATGATTGCCAAGGCATTGATGCTGCACTAGTTGTGCCTGCGCTAATGGAGCTTGAACATTTAGAAGTGTTGTCAGTAGCTGGTATACAAACTGTTTGTGATGAATTTGTCAAGAATTACATTGTTGCACGTGGGCAAAACATGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACTGATGCATCAATCAAAGTCATTGCTGAGCACTGTCCTGGATTATGTGTGCTTGATCTTATGAACTTGTGCAAATTAACGGATTTATCCATTGGATATCTTACTAATGGTTGTCATGCACTTAATACCCTGAAGCTTTGCCGTAACTCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACCACTGGACAGTCACTGAAGGAACTGTCACTTAATAACATTAAGAAGGTTGGTTACCATACAACCTTGTCACTTGCAAACCATGCGAAAAATTTGCATTCGCTAGATCTATCGTGGTGCCGAAATTTGACAGACAATGCGTTGGGTTTGATTGTTGACAGCTGCCTGTCGCTGAGGTTACTTAAACTTTTTGGATGCACTCAGGTAACAGATGTATTTCTTAATGGCCACTCAAACCTACAGATCCAGATAATTGGTTTGAAGATGTCTCCTGTATTGCAACATGTCAAAGTTCCGGATCCTCATCAAAGTGCTTTGAGTTATTCATCAGTCTCCGTAGATTTGGTATATTAG 2130 0.4615 MVQTRATPKPSKSNHIHPLTPAQTHESSSLSATASLPLTSPLLRRSLRLASLSDSDPPPPPATTPDSSVRVSTGNRKRKTDLTGSERDVDQRAKGFLNLRSGKKVLKRAMANDSLNDYKSENGEAKNDSPETSNDVDGEVRTRQLSREEKGKAVVVDGSSREESKAENSTVDVTADADNGASHVRERSRSSITKERGSGSRRNGYMERFHDIARENASRFAHFEPEEENDDHPPPVFEEPHDEIEDWPGPFSTAMKIIKDRGMKLQNVGMGRDTSRTNLCESISWVPKAKVGNAGVSVSVPSLQEMCLKILSKNVDAIVSLESVPDVLRHRLSQLLCDSRKMNSHFFELLVRGTPTEIRLRDCSWLTEEHFTECFQMCDTSNLVVLQLDQCGRCLPDYVIVATLAKSPRHLPRLTTLSFSGGCRLSDGGLRALVSSAPALRSINLSQCSLLTSASLYILAESLRSLLKELYLDDCQGIDAALVVPALMELEHLEVLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDASIKVIAEHCPGLCVLDLMNLCKLTDLSIGYLTNGCHALNTLKLCRNSFSDEAIAAFVETTGQSLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLSLRLLKLFGCTQVTDVFLNGHSNLQIQIIGLKMSPVLQHVKVPDPHQSALSYSSVSVDLVY* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2409 709 MobiDBLite consensus disorder prediction 1 40 - -
Apr1g2409 709 Gene3D Ribonuclease Inhibitor 290 507 IPR032675 -
Apr1g2409 709 MobiDBLite consensus disorder prediction 119 169 - -
Apr1g2409 709 SUPERFAMILY RNI-like 377 669 - -
Apr1g2409 709 Gene3D Ribonuclease Inhibitor 508 588 IPR032675 -
Apr1g2409 709 Gene3D Ribonuclease Inhibitor 593 692 IPR032675 -
Apr1g2409 709 SMART LRR_CC_2 647 672 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 411 436 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 543 568 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 621 646 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 569 593 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 437 462 IPR006553 -
Apr1g2409 709 SMART LRR_CC_2 517 542 IPR006553 -
Apr1g2409 709 PANTHER UNCHARACTERIZED 154 702 - -
Apr1g2409 709 PANTHER F-BOX/LRR PROTEIN 154 702 - -
Apr1g2409 709 MobiDBLite consensus disorder prediction 179 203 - -
Apr1g2409 709 MobiDBLite consensus disorder prediction 1 95 - -
Apr1g2409 709 MobiDBLite consensus disorder prediction 72 94 - -
Apr1g2409 709 MobiDBLite consensus disorder prediction 113 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2409 Apr-Chr1 33710946 33716351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2409 K15082 - gmx:100808150 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2409 1 33710946 33716351 Apr1g2409 1 33710946 33716351 ECH
Apr9g2466 9 32007337 32012557 Apr1g2409 1 33710946 33716351 PCT