Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2453 ATGTTCATCCGAAACAGGATGAAGGCAGGTTTTAATGGAATAAAGGGTAAAGAAATTTCCCTTATTTCCATTGTTCTCATGTCTGCAACTATTATTTTATGGTCATGGGAAAAAACACCCGGTCTTACTGCCTTTCTTCCTCCTCAAACACCACTGCAGCTGTCTTCAGATAATTTAGTTAGTAATCCTTCAGTCCACATGCAAGCACCAGATCCACACTTGAGTGAAGATGGTTCATCATTGCTAAAGAAACAGACTACTAATGAGCCAGAAGAATTACATCTCAAGGGAGAATCTCAATCAGTTCCTGCACACAGCTCTTCTGGAAAGAGCAAAGGTGAAAGTAATACAAGAACAACTTCATATACAGAACGTGTAGAAAGTCTTTCAAGTCCGTCAGATGATGAAGCAAAACACAAAAGAATCTTGGAAGGTGGGAAAAACCATGACATACAAACATTTTCCAGTCCAACGACATCTGAGGCTAAAAAAAATAAAGTTGAGCGGGAAAAAACTTTAAAACAAGAACATAAACCTTGGGAAGACTTTGTCATGAACTCTCCACAGAGAAACTCTTCAATTGGTGGAAAAGACAACAATGGGAATAGTGTTGTGGAAAGTAAAGTCTGTAACTATGCAAAAGGAAAATGGGTCCCAGACAACAACCGGCCTTTATATTCAGGATTTGGTTGCAAACAGTGGCTCTCAGGGATGTGGGCTTGCCGCTTGATGCAGCGTACTGATTTTGAATATGAAAACCTTCGATGGCAACCCAAGGATTGTCAGATGGAAGAATTTGAAGGTTCTAAATTCTTGAGAAGGATGCAAAACAAAACTCTAGCTTTTGTTGGGGACTCATTGGGCCGGCAGCAGTTTCAGTCTTTAATGTGCATGATCACTGGTGGTGTGGAGAATCTTGATGTGGAAGATGTGGGGAAGGAATATGGATTGGTTATAGCTGAGGGCTCTGCCCGTCCTAGTGGGTGGGCATACCGATTCTCAAGCACTAATACTACCATTCTGTACTACTGGTCGGCAAGCCTCTGTGATGTTGAACCTATTGATGTACACAACCCAGACACGGACTATGCAATGCACTTAGATCGCCCACCAGCATTTTTGCGCCAATATCTCCACAAATTTAATGTTGTGGTTCTCAACACAGGTCACCACTGGAATCGTGGAAAGCTCAATGCTAATCGATGGGTAATGCATGTTGGTGGTGTGCCAAATACTGATAGGAAGATAGCAGTGATTTGGGGTGCCAAGAATCTTACGATTCATAGTGTTGTTAGTTGGGTGAATTCACAGCTTCCAAAATATCCTGGTCTGAAGGTATTCTTTCGTACCATCTCTCCTAGACATTTTGTTGGTGGGGACTGGAACACTGGAGGCAGTTGCGACAACACTAAACCAATGTCAGTAGGAAAGGAAATATTGGAAGAGGAGTCCAGTGATCCAGTTGCTGCAAATGCGGTAAAGGGAACAAGGGTTAAGCTCTTGGACATAACAGCCCTTTCTCAGCTCAGGGATGAGGGTCATATATCACGGTTCAGCATTACAGCAAAGCCTGGTGTGCAGGATTGCTTACACTGGTGTTTGCCTGGTGTTCCTGATACATGGAATGAAATACTCTTTGCTCAGATCTAG 1650 0.4273 MFIRNRMKAGFNGIKGKEISLISIVLMSATIILWSWEKTPGLTAFLPPQTPLQLSSDNLVSNPSVHMQAPDPHLSEDGSSLLKKQTTNEPEELHLKGESQSVPAHSSSGKSKGESNTRTTSYTERVESLSSPSDDEAKHKRILEGGKNHDIQTFSSPTTSEAKKNKVEREKTLKQEHKPWEDFVMNSPQRNSSIGGKDNNGNSVVESKVCNYAKGKWVPDNNRPLYSGFGCKQWLSGMWACRLMQRTDFEYENLRWQPKDCQMEEFEGSKFLRRMQNKTLAFVGDSLGRQQFQSLMCMITGGVENLDVEDVGKEYGLVIAEGSARPSGWAYRFSSTNTTILYYWSASLCDVEPIDVHNPDTDYAMHLDRPPAFLRQYLHKFNVVVLNTGHHWNRGKLNANRWVMHVGGVPNTDRKIAVIWGAKNLTIHSVVSWVNSQLPKYPGLKVFFRTISPRHFVGGDWNTGGSCDNTKPMSVGKEILEEESSDPVAANAVKGTRVKLLDITALSQLRDEGHISRFSITAKPGVQDCLHWCLPGVPDTWNEILFAQI* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2453 549 Pfam PMR5 N terminal Domain 209 262 IPR025846 -
Apr9g2453 549 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 10 549 - -
Apr9g2453 549 MobiDBLite consensus disorder prediction 100 128 - -
Apr9g2453 549 MobiDBLite consensus disorder prediction 129 147 - -
Apr9g2453 549 MobiDBLite consensus disorder prediction 56 174 - -
Apr9g2453 549 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 265 547 IPR026057 GO:0016740
Apr9g2453 549 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 10 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2453 Apr-Chr9 31905333 31916093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2453 - - gmx:100788136 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2453 9 31905333 31916093 Apr9g2453 9 31905333 31916093 ECH
Apr9g2453 9 31905333 31916093 Apr1g2423 1 33839420 33843228 PCT