Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2423 ATGAAGGCGGGCTTTTATGGATTGAAGGGTAAAGAAATTTCCCTTATCTCCTTTGTTCTTATGTCCACAACTATTGTTATATGGTCATGGGAGAGAACGCCTGGTGCATTTGTTCCGTCTCAGACATTGATGCAGTTTTCTTCAGATGAAGATGCAAAACAATTTGTGGAAGCTGGGGAAAACCGTAGTGTACCCACTCTTTCAATTCCAACAAAAAATGAGGTTAAATGGAATGAAGCAGAGGTGGAGAAAACTTCAAAACAAGAAAAACATAGAACAGATCTTGCTGTGGACTCTTCACAAGGGAGCTCTTTAATCACTGGAAAAGATGACATCCATTTTAAAAATGATACAGAAAACAAAGTCTGTAACTATGCAAAAGGAAAATGGGTTCCAGACAGCCACCGGCCTTTGTATTCAGGATTAGGTTGCAAGCAATGGTTGTCAGGGATGTGGGCTTGCCGCTTGACACAACGCACTGATTTTGCATATGAGGGGTTTCAATGGAAACCAAAAGATTGTCAAATGGAGGAATTTGAAGGATTTAAATTTTTGCAAAGGATGCAACACAGAACTCTAGCCTTTGTTGGAGACTCATTGGGCCGGCAGCAGTTTCAATCTTTAATGTGCATGATCACTGGTGGTGAGGAGACAAATGATGTGGAAGATGTGGGGAATGAGTATGGTTTGGTTGTAGCTGAGGGTGCTGCCCGCCCTGATGGGTGGGCTTACCATTTCATGAGCACCAATACTACCATTCTATACTACTGGTCAGCAATTCTATGTGATATCAAACCTATCAATGCTAGTGATCCAGGGACAGAGTATGCAATGCATCTTGACCGGCAGCCAGCATTCTTGCGCCAATTCCTTCACAAGTTTGATGTGCTGGTTCTCAACACAGGCCACCATTGGAATCGGGGAAAGCTCAGGGCTAATAGGTGGGTAATGCATGTTGGAGGTGTGCTAAATACTGATAAGAAGATTGCAGTGGTTTGGGGTGCCAAGAATCTCACTGTTCACAGTGTGGTTAGTTGGGTGAACTCGCAGCTTCCAGTCTATCCGGGTCTGAAGGTATTCTTTCGGACCACCTCCCCAAGGCATTTTGCTGGTGGGGACTGGAACACGGGAGGCAGCTGTAATAACACGACACCAATGTCGGTAGGTAAGGAAATATTGGATGAAGAATCGATGGATAACGTTGTTGCAAATGCAGTGAAGGGAACAGGGGTCAAGCTCTTGGACATAACGGCTCTCTCTCAGCTTAGGGATGAGGGTCATATATCACGTTTTAGCATTACAGCCAAGCCTGGTGTGCAGGATTGCTTACATTGGTGTTTGCCTGGCATTCCTGATACATGGAATGAAATAATGTTTGCCCAAATATAG 1389 0.4428 MKAGFYGLKGKEISLISFVLMSTTIVIWSWERTPGAFVPSQTLMQFSSDEDAKQFVEAGENRSVPTLSIPTKNEVKWNEAEVEKTSKQEKHRTDLAVDSSQGSSLITGKDDIHFKNDTENKVCNYAKGKWVPDSHRPLYSGLGCKQWLSGMWACRLTQRTDFAYEGFQWKPKDCQMEEFEGFKFLQRMQHRTLAFVGDSLGRQQFQSLMCMITGGEETNDVEDVGNEYGLVVAEGAARPDGWAYHFMSTNTTILYYWSAILCDIKPINASDPGTEYAMHLDRQPAFLRQFLHKFDVLVLNTGHHWNRGKLRANRWVMHVGGVLNTDKKIAVVWGAKNLTVHSVVSWVNSQLPVYPGLKVFFRTTSPRHFAGGDWNTGGSCNNTTPMSVGKEILDEESMDNVVANAVKGTGVKLLDITALSQLRDEGHISRFSITAKPGVQDCLHWCLPGIPDTWNEIMFAQI* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2423 462 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 462 - -
Apr1g2423 462 Pfam PMR5 N terminal Domain 122 175 IPR025846 -
Apr1g2423 462 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 4 462 - -
Apr1g2423 462 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 178 460 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2423 Apr-Chr1 33839420 33843228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2423 - - gmx:100788136 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2423 1 33839420 33843228 Apr1g2423 1 33839420 33843228 ECH
Apr9g2453 9 31905333 31916093 Apr1g2423 1 33839420 33843228 PCT