Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2427 ATGGCAACCGATCGTTTGACCCGTGTCCACAGTCTCCGTGAGAGGCTTGATGAAACCCTCACTGCCAACAGGAACGAAATTTTGGCCCTTCTGTCAAGGATCGAAGCCAAGGGCAAGGGGATTCTGCAACACCACCAAGTCATTCTTGAGTTTGAGGAAATTCCTGAGGAGAACAGACAGAAGCTGATTGATGGAGCTTTTGGAGAGGTTTTGAGATCTACACAGGAAGCTATAGTTTTGCCACCATGGGTTGCTTTGGCTGTTCGTCCAAGGCCTGGTGTATGGGAGTACCTGAGGGTGAATGTGCACGCTCTTGTCGTTGAGGAGTTGCAAGCTGCTGAGTATCTGCGCTTCAAAGAGGAACTTGTTGATGGAAGTTCAAATGGAAACTTTGTGCTTGAGTTGGACTTTGAACCATTTACTGCATCCTTCCCCCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAATTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCATGACAAGGAGAGCTTGCACCCTCTTTTGGAGTTCCTCAGGCTTCACAGCTACAAGGGAAAGACTCTAATGTTGAATGACAGAATCCATAACCCGGATTCTCTCCAACATGTTCTGAGGAAAGCTGAGGAGTATCTGGGCACAGTTCCTCCTGAAACTCCCTACTCAGAATTTGAGCACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACACCGCAGAGCGTGTCCTTTCTTCAATTCAACTTCTCTTGGATCTTCTTGAGGCTCCTGATCCATGCACCCTAGAGACTTTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTTATTCTTTCTCCCCATGGTTACTTTGCCCAAGACAATGTTTTGGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCCAACGCATTAAGCAACAAGGCTTGGACATTATCCCTCGCATTCTCATTATCACTCGTCTTCTACCTGATGCAGTTGGCACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGAACTGAGCATTGCCACATTCTACGAGTTCCCTTTAGAAATGAGAAGGGAATTATTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCATACCTAGAAACTTACACTGAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATCGTTGGAAACTACAGTGACGGAAACATTGTTGCCTCTTTGTTGGCACACAAATTAGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCTGAATCCGACATTTACTGGAAGAAATTCGAAGAGAAATACCACTTCTCTTGCCAATTCACAGCTGATCTCTTTGCCATGAACCACACAGACTTCATCATCACCAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTATGAGAGTCACACCGCCTTCACCCTTCCTGGACTCTACCGTGTGGTGCACGGTATTGATGTCTTTGATCCAAAGTTCAACATTGTGTCTCCCGGAGCTGATCAAACCATTTACTTCCCATACACTGAAACTAGCCGTAGGTTGACATCCTTCCACCCTGAAATCGAAGAGCTTCTTTACAGCTCAGTGGAGAACGAAGAGCACATATGTGTGTTGAAGGACAGGAGCAAGCCAATTATCTTCACCATGGCAAGGTTGGACCGTGTAAAGAACATCACAGGACTTGTTGAGTGGTATGGTAAGAATGAAAAGCTGAGGCAGTTGGTGAACCTTGTTGTTGTGGCTGGAGATAGGAGGAAGGAGTCAAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGTCTGATTGAGACCTACAAGTTGAATGGGCAATTCAGATGGATTTCCTCACAGATGAATAGAGTGAGGAATGGTGAGTTATACCGTGTGATTTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCAGTGTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGCAAGTCTGGATTCCACATTGACCCTTACCATGGTGATCGTGCTGCTGAGCTTCTTGTTGACTTCTTTGAGAAGTGCAAGGCTGATCCATCTCACTGGGACAGCATCTCAAATGGTGGTCTCCAGCGTATTGAGGAGAAGTACACATGGCAAATTTACTCTCAGAGGCTCTTGACACTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCGTGAGAGCCGCCGCTATCTTGAGATGTTCTATGCTCTTAAGTACCGCAAATTGGCCGAGTCCGTGCCCCTTGCTGTTGAGTAA 2418 0.4673 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVILEFEEIPEENRQKLIDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQAAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIHNPDSLQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDTAERVLSSIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLQRIKQQGLDIIPRILIITRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRNEKGIIRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNEKLRQLVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAAELLVDFFEKCKADPSHWDSISNGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2427 805 Gene3D - 146 275 - -
Apr9g2427 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Apr9g2427 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Apr9g2427 805 Pfam Glycosyl transferases group 1 564 736 IPR001296 GO:0016757
Apr9g2427 805 PANTHER SUCROSE SYNTHASE 1 805 - -
Apr9g2427 805 Gene3D - 25 145 - -
Apr9g2427 805 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Apr9g2427 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Apr9g2427 805 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Apr9g2427 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2427 Apr-Chr9 31682465 31687962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2427 6 805 Glycosyltransferase AT3G43190 85.750 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2427 K00695 - gmx:547508 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2427 9 31682465 31687962 Apr9g2427 9 31682465 31687962 ECH
Apr9g2427 9 31682465 31687962 Apr1g2445 1 34097281 34103153 PCT