Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2445 ATGGCTAATGTGCATCATCTGACCCACTCTTCCTCTTTCCGGGAGAGGCTTGATGAGACTCTCAGTGGTCAAAGGAATGAAATTGTGGCCCTTCTCTCAAGGATTGAAGCCAAGGGCAAGGGAATCCTGCAACACCACCAGGTTATTGCAGAGTTTGAGGAAATCCCTGAGGAGAAAAGGAAAAAACTACTTGATGGGGCCTTTGGAGAAGTTTTGAGATCTACACAGGAAGCCATAGTGTTGCCACCATATGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTCTGGGAGTATCTGCGAGTGAATGTGCACATGCTTGTTGTTGATGAGTTGCGTCCAGCTGAGTATCTGCGTTTCAAGGAGGAACTTGTTGAGGGAAGTGCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCCTTTCCCCGTCCAACTTTGAACAAGTCAATTGGGAATGGTGTCGAGTTTCTCAATCGCCATCTTTCTGCTAAGCTCTTCCATGACAAGGAGAGCATGCAGCCACTGCTTGAATTCCTCAGGCTTCACAGCTACAAGGGAAAGACTATGATGTTGAATGACAGGATTCAAAATCTTAACTCTCTCCAACATGTTTTGAGAAAGGCAGAAGACTATCTGAGCACAATTGCTCCTGCAACGCCCTACTCAGAATTTGAACAAAAATTCCGTGAGATTGGTTTGGAGAGAGGCTGGGGTGACACCGCTGAGCGTGTCCTTGAGATGATTCAGCTTCTGTTGGATCTTCTTGAGGCACCTGACCCTTGCACCCTCGAGACATTCCTTGGAAGAATCCCAATGGTCTTTAATGTTGTTATCCTTTCTCCACATGGTTACTTTGCCCAAGACAATGTCTTGGGGTACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGATATCACCCCTCGTATTCTCATTATTACCCGTCTTCTCCCTGATGCAGTAGGAACTACTTGTGGCCAACGCCTCGAGAAGGTGTACGATACCGAATATTGCCACATTCTTCGAGTTCCATTTAGAACAGAGAAGGGAATTGTTCGCAAGTGGATCTCAAGATTTGAAGTCTGGCCCTACCTAGAGACTTACACTGAGGATGTTGCCCATGAACTTGCCAAAGAGTTGGAAGGCAAGCCTGATCTGATCGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACACAAATTGGGCGTAACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCCGAGTCTGACATTTACTGGAAAAAATTTGAAGACAAATATCACTTTTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTCATCATCACTAGCACATTCCAAGAGATTGCTGGGAGCAAGGATACCGTTGGACAGTATGAGAGTCACACCGCCTTCACCCTTCCAGGACTTTACCGTGTTGTTCATGGTATTGATGTCTTTGATCCAAAGTTCAACATTGTCTCACCTGGAGCTGACATGAACATATACTTCCCATACACTGAAACTAAGCGTAGATTGACATCCTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCTGTGGAGAATGAGGAGCACATATGTGTATTGAAGGACCGCAACAAGCCAATCATCTTTACCATGGCAAGGCTGGACCGTGTGAAGAACATCACAGGGCTTGTTGAGTGGTACGGCAAGAACGAGCGGCTCCGTGAGTTGGTAAACCTGGTGGTTGTGGCAGGAGACAGGAGGAAGGAGTCAAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAAATGTATGGCCTCATTGAGACCTACAAGTTGAATGGACAATTCAGATGGATATCCTCTCAGATGAACAGAGTGAGGAATGGAGAGCTGTACCGTGTGATTTGTGACACAAAGGGTGCTTTTGTCCAGCCTGCAATTTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGCTACCACATTGACCCTTACCATGGTGATCAAGCTGCTGAGATCCTTGTTGACTTCTTTGAGAAGAGCAAGGCTGACCCATCTCATTGGGACAAAATCTCCCAGGGTGGCCTCAAGCGTATTCATGAGAAGTACACATGGCAAATTTACTCTGATAGGCTTCTGACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTCACCAACCTTGATCGCCGTGAGAGCAAACGCTACCTCGAGATGTTCTACGCCCTAAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAAGAGTAA 2424 0.4625 MANVHHLTHSSSFRERLDETLSGQRNEIVALLSRIEAKGKGILQHHQVIAEFEEIPEEKRKKLLDGAFGEVLRSTQEAIVLPPYVALAVRPRPGVWEYLRVNVHMLVVDELRPAEYLRFKEELVEGSANGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMQPLLEFLRLHSYKGKTMMLNDRIQNLNSLQHVLRKAEDYLSTIAPATPYSEFEQKFREIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLEKVYDTEYCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELEGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMNIYFPYTETKRRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNERLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDQAAEILVDFFEKSKADPSHWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRKLAESVPLAVEE* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2445 807 Gene3D - 26 146 - -
Apr1g2445 807 Gene3D - 147 276 - -
Apr1g2445 807 PANTHER SUCROSE SYNTHASE 5 806 - -
Apr1g2445 807 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 296 764 - -
Apr1g2445 807 Pfam Glycosyl transferases group 1 565 739 IPR001296 GO:0016757
Apr1g2445 807 Gene3D Glycogen Phosphorylase B; 528 754 - -
Apr1g2445 807 Pfam Sucrose synthase 11 554 IPR000368 GO:0005985|GO:0016157
Apr1g2445 807 PANTHER - 5 806 IPR012820 GO:0005985|GO:0016157
Apr1g2445 807 TIGRFAM sucr_synth: sucrose synthase 25 803 IPR012820 GO:0005985|GO:0016157
Apr1g2445 807 Gene3D Glycogen Phosphorylase B; 281 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2445 Apr-Chr1 34097281 34103153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2445 1 807 Glycosyltransferase AT3G43190 84.530 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2445 K00695 - gmx:100806761 1533.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2445 1 34097281 34103153 Apr1g2445 1 34097281 34103153 ECH
Apr9g2427 9 31682465 31687962 Apr1g2445 1 34097281 34103153 PCT