Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2393 ATGGAGGAAGTTAACGTTGTAGAAACTAAGGATGGAACTGTTTCAGTAGCTTCTGCGTTTGCTGGTCACCAGGAAGGCCCTTTTGGTGCTGTTATAGTTCGTAATGATGAAATAGTTGCTAGTTGTCACAACATGGTTCTGAGTAACACGGACCCAACTGCTCATGCAGAGGTGACAGCAATAAGAGAGGCTTGTAAGAGGCTTAAGCAGATAGAGCTTTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATCAAGAGGTTGGTATATGGAGCTAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCAGACGCATTGCGAGGTACTGGATTCTATCAGAAAGCACAGCTGGAGATTAAAAGAGCTGATGGTAACGAGGCCATCATTGCCGAAGAAGTTTTTGAGAAAACAAAGGAAAAATTCCAAATGTACTAG 483 0.4286 MEEVNVVETKDGTVSVASAFAGHQEGPFGAVIVRNDEIVASCHNMVLSNTDPTAHAEVTAIREACKRLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAIIAEEVFEKTKEKFQMY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2393 160 SUPERFAMILY Cytidine deaminase-like 18 118 IPR016193 GO:0003824
Apr9g2393 160 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 22 103 IPR002125 -
Apr9g2393 160 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 IPR016192 GO:0008270|GO:0016787
Apr9g2393 160 CDD nucleoside_deaminase 14 116 - -
Apr9g2393 160 Gene3D Cytidine Deaminase, domain 2 13 160 - -
Apr9g2393 160 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1 117 IPR002125 -
Apr9g2393 160 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 20 159 - -
Apr9g2393 160 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 20 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2393 Apr-Chr9 31440934 31443627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2393 - - gmx:100500436 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2393 9 31440934 31443627 Apr1g2471 1 34306646 34309492 PCT