Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2471 ATGGAAGAAATTAATGTGGTTCAAACTAAGGATGGAACCGTTGCAGTAGCTTCTGCGTTTGCTGGTCATCAGGAAGCTATACAGGATAGAGACCACAAATTTTTAAGGAAAGCTGTTGAGGAAGCATATAAAGGAGTAGATTGTGAAGATGGAGGTCCTTTTGGTGCCATTATTGTTTGTAATGATGAAGTAGTTGCAAGTTGTCACAACATGGTTCTTAGGAACACAGACCCAACTGCTCATGCTGAAGTGACAGCAATAAGAAAGGCTTGTGAAAAGCTAAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGCGAACCTTGCCCAATGTGTTTTGGTGCTATACACCTTTCACGAGTTAAGAGGTTGGTTTATGGAGCAAAGGCAGAGGCAGCAATTGCAATTGGGTTCGATGACTTTATTTCAGATGCACTGCGAGGGACTGGAATCTATCAAAAAGCACAGTTGGAGATTAAAAGAGCTGATGGCAAAGAGGCTAACATTGCTGAAGAAGTTTTTCAGAAAACAAAGGAAAAATTCCGAATGTATTAA 561 0.3993 MEEINVVQTKDGTVAVASAFAGHQEAIQDRDHKFLRKAVEEAYKGVDCEDGGPFGAIIVCNDEVVASCHNMVLRNTDPTAHAEVTAIRKACEKLKQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFISDALRGTGIYQKAQLEIKRADGKEANIAEEVFQKTKEKFRMY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2471 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Apr1g2471 186 Pfam MafB19-like deaminase 31 179 IPR028883 GO:0002100|GO:0008251
Apr1g2471 186 SUPERFAMILY Cytidine deaminase-like 24 145 IPR016193 GO:0003824
Apr1g2471 186 Gene3D Cytidine Deaminase, domain 2 30 186 - -
Apr1g2471 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Apr1g2471 186 CDD nucleoside_deaminase 35 142 - -
Apr1g2471 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Apr1g2471 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2471 Apr-Chr1 34306646 34309492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2471 - - gmx:100527067 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2393 9 31440934 31443627 Apr1g2471 1 34306646 34309492 PCT