Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2350 ATGAAACGCCTATATTTATTTCAAGGTTTACTGAAAATGAAGAAGTGGTATGGAGGCTTATTGATAATGGCTCTGGGTGTGATGTTGTTTCTCCTCTACAGCCTCAAAGGAATTCAGCCACAGAAGCAATCAGCAAAACAGTCAGCATACGGTTTCTTCAATAACCATACACCGGATGATTCGATTAATGGAAACATCAATCTTCTGGTAAACTCTTCTGAGGTGGAACTAAAAAGGGTACCAAAACCAACAAAAAGGCCACATTTGGTGCATGTTGAAGGGCTTGATGATCTGTATGACATAAAAAGTTTATCTGAGGGAGAGATGAATGCTGTGCTTATTTGGGATTCCTTACATTCCTTGCTGTCGTGGTCAGATGCTTTGCCTGAAACTGCTCAAGGAGTTAAAGAGGCTTCTATAGCATGGAAAGAGTTGCTATCCACTATTCAAAAGGACAAAGCCTCTATGATTAATAAGATTGATGGCCCAGATATTAAAAAATGCCCATTCTCTGTGACCACACTTGGTAAGGATGTACAAGATAGTGGAATCACTCTTGATCTCCCATGTGGTCTGGTTGTGGATTCGTCTATTACACTGATTGGCATTCCTAATGGACAATATAGAGGCTTCCAGATTGACCTTGCTGGACAAGAACTAGAACAGGAGCCAAATCCTCCAATTATCTTGCATTATAATGTGAATCTTCCTGGAGAAAACATGACAGAGGAACCGTATATTGTTCAAAATACATGGACGAGTGATTTTGGGTGGGGAAAAGAGGAAAAGTGTCCAGCTCGTGGTTCAGCTAACATCCAAGAAGTTGACGGACTTGTTCTCTGCAATGTACAAGTTGTCAGAAGTAACAATGAAGGGAAAGTAAATGTTGGTCAACCTCCTAGTGATATAACTTCTAACATTTCCTCAGAAAGTGCACATAGAATGGCTAATTTCCCCTTTGCTGAGGGTAATCCTTTCACTGCAACATTGTGGGTTGGTTCAGAGGGATTTCATATGACCGTGAATGGAAGGCACGAGACATCGTTTGCATATAGGGAGAAGCTTGAGCCATGGTTAGTGAGCAGCATTAAAGTAACAGGCAATTTAAGTCTCTTATCAACCCTGGCTACAGGTTTACCTGTTACTGAAGATAATGATATAGTTATTGATGTTGAGAGTCTGAAGGCTCCTTCTATCTCCAGAAAGAGGCTTGTTTTGTTGATTGGAGTATTCTCTACCGGAAACAACTTTCAGCGTCGCATGGCCCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCAGATTTTTCATTGGGCTTCACAAGAACAATATCGTTAATTTTGAGTTATGGACTGAAGCTCAAGCATATGGCGATATTCAGTTAATGCCTTTTGTGGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATCATGAAAACAGACGATGATGCTTTTGTTAGGATTGATGAAGTGCTTTCCAGCATTAAAGGAAAGCCATCTGAAGGCCTCTTGTATGGTCTCATATCATCTAAATCATCTCCTCAGAGGGACAAAGGCAGCAAGTGGTACATCAGTGAGGAGGAATGGCCACACGATACATACCCACCATGGGCACATGGTCCTGGCTATGTTATCTCTCGAGACATAGCAAAATTCATTGTTCATGGACACCAGGAAAGAAAACTCAAGCTCTTTAAGTTAGAAGATGTTGCCATGGGCATATGGATTGAACAGTTTAAGAATGGTGGTAAAGAAGTGCATTATGTGAATGATGAGAGGTTTTACAATGCTGGATGTGAATCAAATTATGTACTTGCCCATTATCAAAGCCCCAGGATGGTGCTATGCCTTTGGGAGAAACTGCAGAAAGAACACCAGCCAGTATGCTGTGAGTAG 1959 0.4094 MKRLYLFQGLLKMKKWYGGLLIMALGVMLFLLYSLKGIQPQKQSAKQSAYGFFNNHTPDDSINGNINLLVNSSEVELKRVPKPTKRPHLVHVEGLDDLYDIKSLSEGEMNAVLIWDSLHSLLSWSDALPETAQGVKEASIAWKELLSTIQKDKASMINKIDGPDIKKCPFSVTTLGKDVQDSGITLDLPCGLVVDSSITLIGIPNGQYRGFQIDLAGQELEQEPNPPIILHYNVNLPGENMTEEPYIVQNTWTSDFGWGKEEKCPARGSANIQEVDGLVLCNVQVVRSNNEGKVNVGQPPSDITSNISSESAHRMANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSSIKVTGNLSLLSTLATGLPVTEDNDIVIDVESLKAPSISRKRLVLLIGVFSTGNNFQRRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNIVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSIKGKPSEGLLYGLISSKSSPQRDKGSKWYISEEEWPHDTYPPWAHGPGYVISRDIAKFIVHGHQERKLKLFKLEDVAMGIWIEQFKNGGKEVHYVNDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKEHQPVCCE* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2350 652 Gene3D - 181 374 - -
Apr9g2350 652 Gene3D - 396 632 - -
Apr9g2350 652 SMART Gal_bind_lectin_2 188 376 IPR001079 GO:0030246
Apr9g2350 652 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 88 643 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr9g2350 652 Pfam Galactoside-binding lectin 185 374 IPR001079 GO:0030246
Apr9g2350 652 CDD GLECT 185 373 IPR001079 GO:0030246
Apr9g2350 652 Pfam Galactosyltransferase 418 600 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr9g2350 652 PANTHER - 88 643 - -
Apr9g2350 652 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 184 377 IPR001079 GO:0030246
Apr9g2350 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 185 374 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2350 Apr-Chr9 31083774 31093445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2350 11 652 Glycosyltransferase AT3G06440 52.558 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2350 K20843 - gmx:100816729 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2350 9 31083774 31093445 Apr9g2350 9 31083774 31093445 ECH
Apr9g2350 9 31083774 31093445 Apr7g1461 7 21705306 21711302 PCT