Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1461 ATGAATAAATTGTATGGAGGAGTTCTGATCACTTCACTGTTTATGTTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATTAGTGAAGGTTATTTGACTATACCTGTCCTCATTAATGGTACTAATCCTCTAGAATGGATAAATCCCGTGGTTCCGCCTGCTATTCAAAATCCAGATGTTCATTCTCAAGTTATTTCTTCTGATATTCTTGTGTCTAGCCTCTTTGCTGGGAGTAACTTTTCCAAAGAAGAGATCCAAGCTCTTCAGACATGGAACCAATTGAAACACTTAATAGATCATGCTCAGGGTCTACCTAATGCAGCAGAAGCTATCAAGGAGGCTGCTGGTGCATGGAATAGTCTTATTTCTTCAATTGAAGAGCAAAGACAAGGTCATGCAAATGATAGTTCAAGAACTAAAGAGAAGCAGTGTCCCCATTTTCTTAATAAAATGAATTCCACTGAACTTGGTAATAGTAGTTACAAACTGCAAGTACCTTGTGGCCTGACACAGGGTTCTTCCATCACTGTAATTGGCATTCCAAATGGTCTTCTAGGTAATTTTCGGATTGACTTGACTGGTGAACCACTTCCTGGGGAGCCCGATCCTCCAATTATTTTACACTATAATGTTAGGCTTCATGGTGATAAAGTCACTGAAGATCCAGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGAACGGTGTCCATCTCCTAATTCTGAAAAGGAAAAAGTTGATGAGTTGGAGCAGTGTAATAAGATTGTAGGGAAGAACAGTAGCCAACTTCACACAGCCAGCATGTATTCCCACACTTCAAGACGATCTTCAGCAACAGATGAACAATCAATAAATAGGAAATACTTTCCTTTTAAGCAAGGCTACCCATTTGTTGCAACTCTTAGAGTGGGAACTGAGGGAATCCAAATGACAGTTGATGGAAAGCACATAACCTCGTTTGCTTTTCGTGAAACCTTGGAGCCATGGCTTGTCAGTGAAATAAAAATATCTGGGGACCTCAAATTGATATCTATTCTTGCCAGTGGTCTGCCTACATCAGAGGATTCAGAGCATATTATTGATCTTGAATCATTGAAATCGAGCCCTATATCTGCACAGACTCCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTCAAGCGCCGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTCGATCTAATATGACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGTTGTGGAAAGAAGCACAAACTTATGGAGACATACAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACTTGGAAATCCTTAGCAATCTGCATTTTTGGGACACAAGTTGTTTCAGCAAATTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATGAAGTTCTAGGCTCTCTAAATAGGATCAACTTGGCTCATGGGTTACTGTATGGACTCATCAATTCAGATTCCCGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCTGAGGAATGGAGCGAAGGAACTTATCCTCCTTGGGCACATGGTCCTGGCTATGTGGTTTCACGCGATATAGCAAGCATGGTATACAAGAAATACAGAGAGAACAATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATCGCCGACATGAAGAAGCAAGGTCTAGAAGTTCGGTATGAGAATGAAGCCAGAGTCTATAATGAGGGTTGCAAGGATGGTTATGTGGTTGCCCATTACCAAGGTCCTAGGGAATTGCTCTGTTTGTGGCAGAAACTTCAAGAAGGAAAAGGTGCCAAATGCTGTGGTGATAGGAGATGA 1914 0.4096 MNKLYGGVLITSLFMLFMLMILRYGVMKNPISEGYLTIPVLINGTNPLEWINPVVPPAIQNPDVHSQVISSDILVSSLFAGSNFSKEEIQALQTWNQLKHLIDHAQGLPNAAEAIKEAAGAWNSLISSIEEQRQGHANDSSRTKEKQCPHFLNKMNSTELGNSSYKLQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKVTEDPVIVQNTWTIAHDWGEEERCPSPNSEKEKVDELEQCNKIVGKNSSQLHTASMYSHTSRRSSATDEQSINRKYFPFKQGYPFVATLRVGTEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNMTAVRFFVGLHKSPIVNEELWKEAQTYGDIQLMPFVDYYSLITWKSLAICIFGTQVVSANFVMKTDDDAFVRVDEVLGSLNRINLAHGLLYGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSRDIASMVYKKYRENNLKMFKLEDVAMGIWIADMKKQGLEVRYENEARVYNEGCKDGYVVAHYQGPRELLCLWQKLQEGKGAKCCGDRR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1461 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 357 IPR013320 -
Apr7g1461 637 CDD GLECT 165 354 IPR001079 GO:0030246
Apr7g1461 637 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 67 626 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g1461 637 Gene3D - 377 604 - -
Apr7g1461 637 Gene3D - 157 355 - -
Apr7g1461 637 SMART galectin_3 165 357 IPR001079 GO:0030246
Apr7g1461 637 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 357 IPR001079 GO:0030246
Apr7g1461 637 PANTHER - 67 626 - -
Apr7g1461 637 Pfam Galactoside-binding lectin 165 355 IPR001079 GO:0030246
Apr7g1461 637 Pfam Galactosyltransferase 399 583 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g1461 637 SMART Gal_bind_lectin_2 169 356 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1461 Apr-Chr7 21705306 21711302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1461 1 633 Glycosyltransferase AT1G26810 63.551 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1461 K14413 - gmx:100780913 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1461 7 21705306 21711302 Apr7g1461 7 21705306 21711302 ECH
Apr9g2350 9 31083774 31093445 Apr7g1461 7 21705306 21711302 PCT