Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2343 ATGGTGTTGGCTTCCCCAAACCCAATCAAGAACGAAAGGATCATACCCAATGAGCTTCCCACTGTGGACCTTAAGGCTGAAAGGTCGGAGGTAACAAAACTCATTGTGAAAGCATGTGAAGAGTATGGTTTCTTCAAGGTGATCAACCATGGTATCAGCAATGAAACTATAGCCAAAACTGAAGAGGCAGGGTTTAGTTTCTTTGGGAAACCGGTGACACAGAAGAAACTGGCTGCACCTGCATATGGCTCCAAGAACATAGGGTTCAATGGAGACGTGGGTGAGGTTGAGTACCTTCTTCTCAATGCTACCACTCACTCCATTGCTCAGATATCCAAAAGTATATCCTCTGACTTCAGCTCTACCTTAAGTGCTTACGCTGAGGCAGTGAAGAAGTTAGCATGTGAGATTTTGGAGTTAATTGCAGAGGGCCTGGGGGTCCCCGACACTTGGGTTTTCAGCAGATTCATAAGGGATGCCGACAGTGACTCTCTCCTTAGGCTCAATCACTACCCACCTATGCCTATTATTAACGCACATTGCAAGGACAACAACATGCCCTTTAACTACACCAAGGTTGCCTTTGGAGAGCATTCTGACCCTCAGATCTTAACCATTCTTAGATCCAACGATGTGGGTGGCCTTCAAATCTCTCTTCAAGATGGGGTCTGGGTCCCAGTCAACCCTGACCCCTCAGCTTTCTACGTTAACGTGGGTGATGTACTAGAGGTCATGACAAATGGAAGATTTGTGAGCGTGAGACATAGGGCTATGACAAACTCATACACATCAAGAATGTCAATGGCATATTTTGGGGCTCCACCACTGCATGCTTGCATTGTTGCTCCACCAATTATGGTTACACCCCAGAGGCCCTCTCTCTTCAGATCATTTACTTGGGCCGATTACAAGAAGGCCACATACTCTCTAAGGCTTGGAGACAGCCGCATTGAACTTTTCAGAAAGTGCAAAGAAATAGAGTAA 984 0.4614 MVLASPNPIKNERIIPNELPTVDLKAERSEVTKLIVKACEEYGFFKVINHGISNETIAKTEEAGFSFFGKPVTQKKLAAPAYGSKNIGFNGDVGEVEYLLLNATTHSIAQISKSISSDFSSTLSAYAEAVKKLACEILELIAEGLGVPDTWVFSRFIRDADSDSLLRLNHYPPMPIINAHCKDNNMPFNYTKVAFGEHSDPQILTILRSNDVGGLQISLQDGVWVPVNPDPSAFYVNVGDVLEVMTNGRFVSVRHRAMTNSYTSRMSMAYFGAPPLHACIVAPPIMVTPQRPSLFRSFTWADYKKATYSLRLGDSRIELFRKCKEIE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2343 327 SUPERFAMILY Clavaminate synthase-like 17 314 - -
Apr9g2343 327 PRINTS Isopenicillin N synthase signature 35 52 - -
Apr9g2343 327 PRINTS Isopenicillin N synthase signature 198 219 - -
Apr9g2343 327 PRINTS Isopenicillin N synthase signature 234 260 - -
Apr9g2343 327 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 322 - -
Apr9g2343 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 322 - -
Apr9g2343 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
Apr9g2343 327 Pfam 2OG-Fe(II) oxygenase superfamily 163 272 IPR044861 -
Apr9g2343 327 Gene3D - 4 311 IPR027443 -
Apr9g2343 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 274 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2343 Apr-Chr9 31019001 31024746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2343 8 321 Glycosyltransferase AT5G59530 26.979 4.83e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2343 K04125 - gmx:100816206 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2343 9 31019001 31024746 Apr9g2343 9 31019001 31024746 ECH
Apr9g2343 9 31019001 31024746 Apr1g2031 1 29852119 29857479 PCT