Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2031 ATGGTTGTGGCCTCGATCACGAGTGAAGAGATTTTACCCATTGAACTTCCAACGGTGGACTTAGCGGCAGAAAGATCGACGGTGATAAAACTCATCGTGAAAGCTAGTGAGGAGTATGGTTTCTTCAACGTGATTAACCATGGTGTTCCTCATGACACCATAGCCAAAATGGAAAAAGCGGGTTTTGATTTCTTTGCAAAACCACTTGCCCAAAAGAAACAGGATGCACCTGATCATTATGGATTCAAAAACATAGGGATCAATGGAGACATGGGTGAGGTTGAGTATCTTCTCCTCAATGCTGCTTCTATTGCTCAGTTCATGAACATCTCCAATGAACCATCAAACTTCAGCTCTACTGTGAGTGCATACAGAGATGCTGTTAGGGAGCTAGCATGTGAGATATTGGAGCTAATGGCAGAGGGTCTGGGGGTCCCGGATACATTGGTATTCAGCAGGTTGATCAGCGAGGTTGATAGTGACTCAGTGCTCAGGTTCAATCACTACCCACCTATACTTAACAAAGACTGCAAAGATAAGGACAAGTCGCCTTCTCACAGCCATAACAAGGTTGGCTTTGGGGAGCATTCTGACCCTCAGATTCTTACCATACTCAGATCCAACGATGTGGGTGGCCTCCAAATCTCTCTTCAAGATGGGGTGTGGAACCCAGTTACCCCTGACCCCTTAGCTTTCTGTGTTAATGTGGGTGATCTCTTACAGGTTATGACAAATGGAAGATTTGTGAGTGTGAGACACAGGGCAGTGACCAACGCATACAAGTGTAGAATGTCGGTGGCATACTTTGGGGCTCCACCACTTGATGCATGCATTGTTGCTCCTTCAGTTATGGTTACACCACAGAGGCCCTCCCTCTACAAACCCTTCACTTGGGCTGAATACAGGAAAGTCACCTACTCTTTGCGGCTTGGAGAACGCCGCATTGACCTTTTCAGGAACTGCACACAAGTAGAGTAA 978 0.4632 MVVASITSEEILPIELPTVDLAAERSTVIKLIVKASEEYGFFNVINHGVPHDTIAKMEKAGFDFFAKPLAQKKQDAPDHYGFKNIGINGDMGEVEYLLLNAASIAQFMNISNEPSNFSSTVSAYRDAVRELACEILELMAEGLGVPDTLVFSRLISEVDSDSVLRFNHYPPILNKDCKDKDKSPSHSHNKVGFGEHSDPQILTILRSNDVGGLQISLQDGVWNPVTPDPLAFCVNVGDLLQVMTNGRFVSVRHRAVTNAYKCRMSVAYFGAPPLDACIVAPSVMVTPQRPSLYKPFTWAEYRKVTYSLRLGERRIDLFRNCTQVE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2031 325 PANTHER PLANT GIBBERELLIN 2-OXIDASE 5 320 - -
Apr1g2031 325 SUPERFAMILY Clavaminate synthase-like 13 311 - -
Apr1g2031 325 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 272 IPR005123 -
Apr1g2031 325 Pfam non-haem dioxygenase in morphine synthesis N-terminal 16 74 IPR026992 -
Apr1g2031 325 Pfam 2OG-Fe(II) oxygenase superfamily 162 270 IPR044861 -
Apr1g2031 325 Gene3D - 3 308 IPR027443 -
Apr1g2031 325 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 320 - -
Apr1g2031 325 PRINTS Isopenicillin N synthase signature 32 49 - -
Apr1g2031 325 PRINTS Isopenicillin N synthase signature 196 217 - -
Apr1g2031 325 PRINTS Isopenicillin N synthase signature 232 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2031 Apr-Chr1 29852119 29857479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2031 14 319 Glycosyltransferase AT5G59530 30.275 9.56e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2031 K04125 - gmx:100811043 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2031 1 29852119 29857479 Apr1g2031 1 29852119 29857479 ECH
Apr9g2343 9 31019001 31024746 Apr1g2031 1 29852119 29857479 PCT