Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2333 ATGAGAAACTCGAAGCCGTTATCTCTCATCTTCTGCACTCTACTTTTCGCCACAATTTCAACCCCAGTAAGTAACCACAAAATTATCCCTCAAAAGGAGACCAATCTGATAGAAGAAACTTGCAAGCAAACACCCCATCATGACCTCTGCGTTCAATACCTCTTATCTGACCCGCGTAGTTCCAATGCAGATGTCACAGGGTTAGCACTAATCATGGTTAACGTAATCAAAGCCAAAGCAGACAATGCCTTGGACAAAATCCACCAACTGCTTCAGGAAGGATCTGAAACTGATCAAAAGGAAGCACTTATTTTGTGTGCTGGTCGATACAAAGCAATTCTGGAAGCTGATGTGCCGCAAGCTGTTGCAGCTTTGCAGAAAGGGGACCCAAAGTTTGCAGAAGATGGTGCAAATGATGCTGTTGTTGAAGCCACCTCTTGTGAGAATAGCTTCTCTGGGAAATCACCACTCACTTATCACAACAATGCTAGGCATGATGCTGCAGCCACAACTGCGGCTATTGTTAGACAATTGCTCTAG 540 0.4444 MRNSKPLSLIFCTLLFATISTPVSNHKIIPQKETNLIEETCKQTPHHDLCVQYLLSDPRSSNADVTGLALIMVNVIKAKADNALDKIHQLLQEGSETDQKEALILCAGRYKAILEADVPQAVAALQKGDPKFAEDGANDAVVEATSCENSFSGKSPLTYHNNARHDAAATTAAIVRQLL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2333 179 Coils Coil 73 93 - -
Apr9g2333 179 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 178 IPR006501 GO:0004857
Apr9g2333 179 CDD CIF_like 34 178 IPR034087 GO:0004857|GO:0043086
Apr9g2333 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 179 IPR035513 -
Apr9g2333 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 178 IPR035513 -
Apr9g2333 179 SMART PMEI_2 32 174 IPR006501 GO:0004857
Apr9g2333 179 Pfam Plant invertase/pectin methylesterase inhibitor 35 162 IPR006501 GO:0004857
Apr9g2333 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 179 - -
Apr9g2333 179 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 21 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2333 Apr-Chr9 30958925 30959485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2333 - - gmx:100306719 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2333 9 30958925 30959485 Apr9g2333 9 30958925 30959485 ECH
Apr1g2040 1 29944091 29944807 Apr9g2333 9 30958925 30959485 PCT