Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2332 ATGAGGATGAGCTCACTCTCCGTGTCCTCTTTTGCAGTCCATATTCTTCTTCTATCCTGTGTTCTTTTCACACCTACTCAATCCTCTGATGGGAGTGAAAATGAGGATTTGATAGACCAAATATGCAAAAAGACACCCTTTTATGACCTCTGCAGTTCAATCTTACATTCAAATCCTTCAACCCCCAAAGATGATCCAAAGGGCATGGCACTCATAATGGTGAACGACATTCTGGCAAATGCTACTGACACACTGAGTTATATTGAAGAGTTGATCAAGCAAACCACAGACCGACAATTGGAGCAACAATTGGCGTTCTGTGCTGAGTCTTACGTTCCAATTGTGAAATACATTCTCCCACAAGCTGCTGATGCCATAAGACAAGGTCAATTTGGGTTTGCCAGTTACAACATATTTTATGCTGAGAAGGAAGTAACTTCTTGTGACAAGAAATTCTCTGGCTCAACTCAGTCACCAATAAGTGATAGAAATAGCATTATGCAGAAGCTCGTGGACGTGGCTGCAGCCATAGTTAAACTATTATTGAATGGCTGA 555 0.4144 MRMSSLSVSSFAVHILLLSCVLFTPTQSSDGSENEDLIDQICKKTPFYDLCSSILHSNPSTPKDDPKGMALIMVNDILANATDTLSYIEELIKQTTDRQLEQQLAFCAESYVPIVKYILPQAADAIRQGQFGFASYNIFYAEKEVTSCDKKFSGSTQSPISDRNSIMQKLVDVAAAIVKLLLNG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2332 184 SMART PMEI_2 33 177 IPR006501 GO:0004857
Apr9g2332 184 CDD CIF_like 35 181 IPR034087 GO:0004857|GO:0043086
Apr9g2332 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 177 IPR006501 GO:0004857
Apr9g2332 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 184 - -
Apr9g2332 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 182 IPR035513 -
Apr9g2332 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 181 IPR006501 GO:0004857
Apr9g2332 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 181 IPR035513 -
Apr9g2332 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Apr9g2332 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2332 Apr-Chr9 30953401 30954141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2332 - - gmx:100820305 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2332 9 30953401 30954141 Apr9g2332 9 30953401 30954141 ECH
Apr9g2332 9 30953401 30954141 Apr1g2040 1 29944091 29944807 PCT