Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2299 ATGGGAGCGCCAGAGAAATCACAGCCAAACGCTAATTCGATGCAGCGTGTCAAGGTATATCGTCTGAATGATGGTGGGAAATGGGATGACCAGGGCACTGGACATGTCGCCATTGATTATCTGGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGATGAAGAAGACAATGAGACCATACTTTTGCATTGCATCAATTCTGCTGATATTTATAGGAAACAAGAAGGTAATACAATTATCTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTCCAAGAGCCAACTGGCTGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTTAATACTTTAAATACTGAGCCATTCCACAGCGTTAATGGCGATTTAAGGGAGTTGCCTGCTGTTGAGCTATCAACACTTCCTTTGATTCTAAAGACTGTGGTTGATAGTGGCATTACAGATCAGTTGCGGCTTACAGAACTACTATTAAGTGATCAAGAGTTTTTTCTAAAGCTGATGGAAGTATTCAGAGTGTGTGAAGACTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATCATTTTGTTGAATAGCCCACCAATTTTTGAGAGAATTTTTAGTGATGACTATATAGTGGACATTATTGGTTCCCTTGAGTATGATCCAGAGGTTCCTTGTGTTCAACATCATCGTAAATTTTTAAAGGAGCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGATCCTGCTGTGTTGTCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTTTGGCTAGAATCTTGGATGAGGCTACTAGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCTTTGTTGTCTCTTTGTTGAAGGATGACAGTACATTTATCCAGGAGTTGTTTGCTAGGCTAAAATCAACCACCACTTCTCAAGAATCAAAGAAAAACTTGGTCTATTTCTTGCATGAGTTTTGTAGTTTGAGCAAGAGCTTACAAATGGTCCAGCAGCTTCGGCTTTTTAGAGATCTGATGAATGAAGGCATCTTTGATGTTGTCACCAATGTTCTGCAAAGTCAAGACAAGAAGCTTGTGCTGACTGGAACAGATATCCTCATTCTTTTCTTGAATCAGGATCCTAATCTTCTGCGATCCTATGTTGTTCGGCAGGAAGGAATTGCTCTTTTAGGACTTTTGGTTAAAGGAATGCTAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAGCTTATTGGACTCATGCACATTATCTGGACCGCAGAGGGACACTATTATTGACATTTTCTTTGAGAAGCATTTGGGTCAACTGATCGAAGTTATAACAGAATCTTGTCCTTCAGAAAATAGTGCTGATGCAATTGGAAAGTCAATAGGTCCTGGACTTCAAGTTCAGTGTCAAAGTCGAACAAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGTGTCCTACATCACCCATACAGAATAAAGTGCAACTTTCTTCTTAATAATGTGATTGAAAAAATTTTGCTACTAACACGGAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGATTCATTCGAACTATTCTCTCCCGCCATGATGAGCATCTGATAAATTATTTTGTTAGGAATAACGTTCTTAAACCAATTATCAATGCCTTTGTTGCTAATGGCAATCGCTACAATCTATTCCATTCTGCTGTTTTGGAACTTTTTGAGTTTATTCGAAAGGAGAATCTGAAATTGTTGCTGAAATACATAGTCGATTCCTTTTGGGACCAGTTGACGAAGTTTGAGCATTTGGTTTCAATTCACTCGCTGAAAGTAAAATATGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGCTGCTACTGTAGTGGACCTTCGAAGACGAAATGATGAGCGTGCTCTGGAGAAAGAAGAAGAACGCTACTTTAGTGAGGATGGTGATGAGGAGGATATTGCTTCTGCATCTGTTCCATGCAATCAGAAAGGACACCAACAACCTAATCTATCCAATGGAGTTGCTGCAAGCTATTCACAGTTAAGTCCAAGGTCACTGGTGGACTATGATGATGATGAGGATGATGATGATTACAAACCACCACCAAGGAAGCAGCCAGAAGCTTCTGAGGAAGATGAGGGGATAATGGAATCTCTTAGGCTGAAGAGGAAATTGCCTTCAAAGGATAAGGAGCCTGAACATTTGAAGAAACAAAAGTTATCGAAGAATTCAAAATCTAAAGAAAGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCAGTGCTACCTAGTAAGAAAACAGCAATCAACATTAATACAAGTGCTCGGACGGTTGAGGGGCGGATGGGCTCAAGCGAAGACAATCAGGAAGATGGACCAGATCTTTCTAGAAGCAGCTCCAATAATAGCAACGTTGCAGTTGAAGATAACCATGTAGAGAAAGATGCTGCAGCCCCTAGAAACTTTTCTGATCGCTTGCATGCAAAATCAGACAACAATCACAACATGCAATTGGGTGGAGAGGAACGTCCGTTAGTTACCCCGAAATCATCGCCAGAGATGGCTGTAAATGGATCGTAA 2658 0.3988 MGAPEKSQPNANSMQRVKVYRLNDGGKWDDQGTGHVAIDYLERSEELGLFVYDEEDNETILLHCINSADIYRKQEGNTIISWRDPEYATELALSFQEPTGCSYIWDHICNVQRNMHFNTLNTEPFHSVNGDLRELPAVELSTLPLILKTVVDSGITDQLRLTELLLSDQEFFLKLMEVFRVCEDLENMDGLHMIFKIVKGIILLNSPPIFERIFSDDYIVDIIGSLEYDPEVPCVQHHRKFLKEHVVFKEAIPIKDPAVLSKIHQTYRVGFLKDVVLARILDEATSANLNSIIHSNNAFVVSLLKDDSTFIQELFARLKSTTTSQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTNVLQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIALLGLLVKGMLTDFEENMHCQFLEILRSLLDSCTLSGPQRDTIIDIFFEKHLGQLIEVITESCPSENSADAIGKSIGPGLQVQCQSRTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKILLLTRRAERYLVVGAVRFIRTILSRHDEHLINYFVRNNVLKPIINAFVANGNRYNLFHSAVLELFEFIRKENLKLLLKYIVDSFWDQLTKFEHLVSIHSLKVKYEQCLDNGGTKDAATVVDLRRRNDERALEKEEERYFSEDGDEEDIASASVPCNQKGHQQPNLSNGVAASYSQLSPRSLVDYDDDEDDDDYKPPPRKQPEASEEDEGIMESLRLKRKLPSKDKEPEHLKKQKLSKNSKSKESVFAALCSTLSQAVLPSKKTAININTSARTVEGRMGSSEDNQEDGPDLSRSSSNNSNVAVEDNHVEKDAAAPRNFSDRLHAKSDNNHNMQLGGEERPLVTPKSSPEMAVNGS* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2299 885 MobiDBLite consensus disorder prediction 706 773 - -
Apr9g2299 885 MobiDBLite consensus disorder prediction 788 885 - -
Apr9g2299 885 PANTHER BINDING PROTEIN-RELATED 1 815 - -
Apr9g2299 885 Gene3D - 10 127 IPR011993 -
Apr9g2299 885 SUPERFAMILY PH domain-like 15 112 - -
Apr9g2299 885 MobiDBLite consensus disorder prediction 834 857 - -
Apr9g2299 885 Gene3D - 283 615 IPR011989 -
Apr9g2299 885 MobiDBLite consensus disorder prediction 788 808 - -
Apr9g2299 885 Pfam Phosphatase 4 regulatory subunit 3 169 357 IPR006887 -
Apr9g2299 885 SUPERFAMILY ARM repeat 291 598 IPR016024 -
Apr9g2299 885 MobiDBLite consensus disorder prediction 722 769 - -
Apr9g2299 885 PANTHER ATP SYNTHASE GAMMA-RELATED 1 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2299 Apr-Chr9 30687878 30702218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2299 K17491 - gmx:100786790 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2299 9 30687878 30702218 Apr9g2299 9 30687878 30702218 ECH
Apr9g2299 9 30687878 30702218 Apr1g2084 1 30368773 30387254 PCT