Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2084 ATGGGCGCGCCGGAGAAATCGCAGACTATCGCAAATTCGATGCAGAGGTCAGAAGAGCTGGGTTTATTTGTTTATGACGAGGAAGACAATGAGACCATACTTTTGCATCGCATTTCTCCTGATGATATTTATAGGAAACAGGAAGATTCAATTATTTCATGGAGAGATCCAGAATATGCTACTGAACTGGCACTTAGCTTTCAAGAACCTGGTGGTTGCTCTTACATATGGGACAATATTTGCAGTGTGCAAAGGAATATGCATTTTAATACTTTAAGTAGTGAGGCATTTCACAGTGTAAACAGTGAGTTAAGGGAGTTGCCTGCAGTTGAATTGTCAACGCTTCCTTTGATTGTTAAGATGGTGGGTGAGAGTGGCATTGCTGATCAGTTGCGGCTTACAGAACTAATCCTAAGTGATCAAGACTTTTTTAGGAAGCTCATGGAACTATTCAGAGTTTGTGAAGATTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAATCAAAGGGATCATTTTGCTTAATAGTACACAAATTTTTGAGCGAATATTGAGCGACGAATTTATTGTGGACATTATTGGTGCCCTCGAGTATGATCCAGAGGTTCCTCATGTTCAACATCATCGTAAATTCTTAATGGAGCATGTTATTTTTAAGGAGGCCATACCTATAAAAAATACAATTGTGTTATCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTTTGGCTAGAATTTTGGATGAGGCCACTATTGCAAGTCTTAATTCCATAATACATGCAAACAATGCCATTGTTGTTTCTTTATTGAAGGATGACAGTACATTTATTCAGGAGTTATTTGCTAGGTTAAAATTGCCCACCACCTCTCCTGAGTATAAGAAAAATATGGTCCATTTCTTGCATGAGTTTTGTAGTTTAAGCAAGAGCTTACAGATGGTACAGCAGCTTCGGCTTTTTCGGGATCTGATGAATGAGGGCATCTTTGACATCATCACTGACATCTTGCAAAGTCAAGACAAGAAACTTGTGCTTACTGGAACAGATATCCTCACACTCTTCTTGAATCAGGATCCTAATCTACTGCGGTCTTATGTTGTTGGGCAGGAAGGAATTACCCTTCTTGGACTATTGGTTAAAGGAATGATAACAGATTTTGGAGATGATATGCATTGCCAGTTTCTTGAGATTCTCCGCAATCTGTTAGACTCATGCTCATTGTCTGGAGCACAGAGGGATGCTATTATTGACATTTTCTATGAGAAGCATTTGGGTCAACTGATTGAAGTGATAATAGCATCATGTCCTTCAGAAAAAGTTGTTCATGCAAGCAGCAAAACAATAGATCCTGGTCCAAGAATTAAGTATGTCAGTGGGGGGACAAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGCGTCCTCCACCACCCATACAGGATAAAGTGCAACTTTCTTCTTAATAAAGTGATTGATAAAATTTTGTTACTGACACTGAGAAGAGAAAAATACCTAGTTGTTGGTGCTGTTCGGTTTGTTCGTACTATTCTCTCACGTCATGATGAGCATCTGATAAATCATTTTGTTAGAAACGACCTTCTCAAGCCAATAGTAGATGCTTTCATAGCTAATGGCTATCGCTATAATCTGCTCAATTCTGCTGTTCTTGAACTTTTTGAGTATATTCGGAAGGAGAATCTTAAACTGTTGCTGAAGTATATTGTTGATTCTTTCTGGGACCAGCTAGTGAAATTCGAGTATTTGGTTTCCATTCATTCACTGAAAGTAAAATATGAGCAGTTTTTGGATAATGATGGGACAAAAGGTACTGTTATTATCAATGACCGAAGAAGACTGGATGAGCGCGCTCCAGATAAAGAAGAGGATGACTACTTTAATGACAGTGATGAGGAGGATACAACCTCTACATCAATTTCACATAATCATAAAGGGCAGCAACAACAACCAGTGTTATCCAATGGAGTTGCTGCAAGCAACTCACAATTAAGTCCAAGGTCTGGTGGGCTGGTTGACTATGATGATGATGAAGATGATGAAGATTACAGGCCACCGCCAAGGAAGAAGCCTGAGGTTTCAGAGGAGGATGAAGGGACAGTGGAGTCTTTTAGGCTGAAAAGAAAATTGCCTTCAAAAGATAAAGAGGAGACTGAACTTGTACGGAAGCAAAAATTGTCTAAAAATTCAAAATCAAAGGACAGTGTTTTTGCTTCCTTGTGTTCAACGTTGAGCCATGCTGTGCTACCTGGCAAGAAACCTGCAAGTAATATTCATACTGGTCCTTGGACAACAGATGGGAACGTGAGCTCAAGTGAAGGTATTCAAGAAAAGGAGCCAGATGTTTCTAGAAACTGCTGTGAGAGTAGCAATGAGACAGCTGAAGTAAACCATGTAGAGAAAGAAGCTGCTGCTTATAGAAATTTTTCTGATGGCTTGTATGGCACTTCAGATAATGGACAGTTGGGTGGCGAGGAACATACATTGGTTTCACCAAAATCCTCACCAGAGATGACCGTAAGTGGATCTTGA 2574 0.3924 MGAPEKSQTIANSMQRSEELGLFVYDEEDNETILLHRISPDDIYRKQEDSIISWRDPEYATELALSFQEPGGCSYIWDNICSVQRNMHFNTLSSEAFHSVNSELRELPAVELSTLPLIVKMVGESGIADQLRLTELILSDQDFFRKLMELFRVCEDLENMDGLHMIFKIIKGIILLNSTQIFERILSDEFIVDIIGALEYDPEVPHVQHHRKFLMEHVIFKEAIPIKNTIVLSKIHQTYRVGFLKDVVLARILDEATIASLNSIIHANNAIVVSLLKDDSTFIQELFARLKLPTTSPEYKKNMVHFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDIITDILQSQDKKLVLTGTDILTLFLNQDPNLLRSYVVGQEGITLLGLLVKGMITDFGDDMHCQFLEILRNLLDSCSLSGAQRDAIIDIFYEKHLGQLIEVIIASCPSEKVVHASSKTIDPGPRIKYVSGGTKPEILSNICELLCFCVLHHPYRIKCNFLLNKVIDKILLLTLRREKYLVVGAVRFVRTILSRHDEHLINHFVRNDLLKPIVDAFIANGYRYNLLNSAVLELFEYIRKENLKLLLKYIVDSFWDQLVKFEYLVSIHSLKVKYEQFLDNDGTKGTVIINDRRRLDERAPDKEEDDYFNDSDEEDTTSTSISHNHKGQQQQPVLSNGVAASNSQLSPRSGGLVDYDDDEDDEDYRPPPRKKPEVSEEDEGTVESFRLKRKLPSKDKEETELVRKQKLSKNSKSKDSVFASLCSTLSHAVLPGKKPASNIHTGPWTTDGNVSSSEGIQEKEPDVSRNCCESSNETAEVNHVEKEAAAYRNFSDGLYGTSDNGQLGGEEHTLVSPKSSPEMTVSGS* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2084 857 MobiDBLite consensus disorder prediction 827 857 - -
Apr1g2084 857 Gene3D - 7 103 IPR011993 -
Apr1g2084 857 PANTHER ATP SYNTHASE GAMMA-RELATED 12 774 - -
Apr1g2084 857 PANTHER BINDING PROTEIN-RELATED 12 774 - -
Apr1g2084 857 SUPERFAMILY ARM repeat 147 594 IPR016024 -
Apr1g2084 857 MobiDBLite consensus disorder prediction 632 748 - -
Apr1g2084 857 Pfam Phosphatase 4 regulatory subunit 3 141 329 IPR006887 -
Apr1g2084 857 MobiDBLite consensus disorder prediction 772 790 - -
Apr1g2084 857 Gene3D - 249 575 IPR011989 -
Apr1g2084 857 MobiDBLite consensus disorder prediction 654 682 - -
Apr1g2084 857 MobiDBLite consensus disorder prediction 763 800 - -
Apr1g2084 857 MobiDBLite consensus disorder prediction 696 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2084 Apr-Chr1 30368773 30387254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2084 K17491 - gmx:100802657 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2084 1 30368773 30387254 Apr1g2084 1 30368773 30387254 ECH
Apr9g2299 9 30687878 30702218 Apr1g2084 1 30368773 30387254 PCT